verticapy.machine_learning.vertica.ensemble.XGBClassifier¶
- class verticapy.machine_learning.vertica.ensemble.XGBClassifier(name: str = None, overwrite_model: bool = False, max_ntree: int = 10, max_depth: int = 5, nbins: int = 32, split_proposal_method: Literal['local', 'global'] = 'global', tol: float = 0.001, learning_rate: float = 0.1, min_split_loss: float = 0.0, weight_reg: float = 0.0, sample: float = 1.0, col_sample_by_tree: float = 1.0, col_sample_by_node: float = 1.0)¶
Creates an
XGBClassifierobject using the Vertica XGB_CLASSIFIER algorithm.Parameters¶
- name: str, optional
Name of the model. The model is stored in the DB.
- overwrite_model: bool, optional
If set to
True, training a model with the same name as an existing model overwrites the existing model.- max_ntree: int, optional
Maximum number of trees that can be created.
- max_depth: int, optional
aximum depth of each tree, an
integerbetween1and20, inclusive.- nbins: int, optional
Number of bins used to find splits in each column, where more splits leads to a longer runtime but more fine-grained, possibly better splits. Must be an
integerbetween2and1000, inclusive.- split_proposal_method: str, optional
Approximate splitting strategy, either
globalorlocal(not yet supported).- tol: float, optional
Approximation error of quantile summary structures used in the approximate split finding method.
- learning_rate: float, optional
Weight applied to each tree’s prediction. This reduces each tree’s impact, allowing for later trees to contribute and keeping earlier trees from dominating.
- min_split_loss: float, optional
Each split must improve the model’s objective function value by at least this much in order to avoid pruning. A value of
0is the same as turning off this parameter (trees are still pruned based on positive / negative objective function values).- weight_reg: float, optional
Regularization term that is applied to the weights of the leaves in the regression tree. A higher value leads to more sparse/smooth weights, which often helps to prevent overfitting.
- sample: float, optional
Fraction of rows used per iteration in training.
- col_sample_by_tree: float, optional
floatin the range(0,1]that specifies the fraction of columns (features), chosen at random, to use when building each tree.- col_sample_by_node: float, optional
floatin the range(0,1]that specifies the fraction of columns (features), chosen at random, to use when evaluating each split.
Attributes¶
Many attributes are created during the fitting phase.
- trees_: list of BinaryTreeClassifier
Tree models are instances of `
BinaryTreeClassifier, each possessing various attributes. For more detailed information, refer to the documentation forBinaryTreeClassifier.- features_importance_: numpy.array
The importance of features. It is calculated using the average gain of each tree. To determine the final score, VerticaPy sums the scores of each tree, normalizes them and applies an activation function to scale them. It is necessary to use the
features_importance()method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.- features_importance_trees_: dict of numpy.array
Each element of the array represents the feature importance of tree i. The importance of features is calculated using the average gain of each tree. It is necessary to use the
features_importance()method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.- logodds_: numpy.array
The log-odds. It quantifies the logarithm of the odds ratio, providing a measure of the likelihood of an event occurring.
- eta_: float
The learning rate, is a crucial hyperparameter in machine learning algorithms. It determines the step size at each iteration during the model training process. A well-chosen learning rate is essential for achieving optimal convergence and preventing overshooting or slow convergence in the training phase. Adjusting the learning rate is often necessary to strike a balance between model accuracy and computational efficiency.
- n_estimators_: int
The number of model estimators.
- classes_: numpy.array
The classes labels.
Note
All attributes can be accessed using the
get_attributes()method.Note
Several other attributes can be accessed by using the
get_vertica_attributes()method.Examples¶
The following examples provide a basic understanding of usage. For more detailed examples, please refer to the Machine Learning or the Examples section on the website.
Important
Many tree-based models inherit from the
XGBbase class, and it’s recommended to use it directly for access to a wider range of options.Load data for machine learning¶
We import
verticapy:import verticapy as vp
Hint
By assigning an alias to
verticapy, we mitigate the risk of code collisions with other libraries. This precaution is necessary because verticapy uses commonly known function names like “average” and “median”, which can potentially lead to naming conflicts. The use of an alias ensures that the functions fromverticapyare used as intended without interfering with functions from other libraries.For this example, we will use the winequality dataset.
import verticapy.datasets as vpd data = vpd.load_winequality()
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolor1 3.8 0.31 0.02 11.1 0.036 20.0 114.0 0.99248 3.75 0.44 12.4 6 0 white 2 3.9 0.225 0.4 4.2 0.03 29.0 118.0 0.989 3.57 0.36 12.8 8 1 white 3 4.2 0.17 0.36 1.8 0.029 93.0 161.0 0.98999 3.65 0.89 12.0 7 1 white 4 4.2 0.215 0.23 5.1 0.041 64.0 157.0 0.99688 3.42 0.44 8.0 3 0 white 5 4.4 0.32 0.39 4.3 0.03 31.0 127.0 0.98904 3.46 0.36 12.8 8 1 white 6 4.4 0.46 0.1 2.8 0.024 31.0 111.0 0.98816 3.48 0.34 13.1 6 0 white 7 4.4 0.54 0.09 5.1 0.038 52.0 97.0 0.99022 3.41 0.4 12.2 7 1 white 8 4.5 0.19 0.21 0.95 0.033 89.0 159.0 0.99332 3.34 0.42 8.0 5 0 white 9 4.6 0.445 0.0 1.4 0.053 11.0 178.0 0.99426 3.79 0.55 10.2 5 0 white 10 4.6 0.52 0.15 2.1 0.054 8.0 65.0 0.9934 3.9 0.56 13.1 4 0 red 11 4.7 0.145 0.29 1.0 0.042 35.0 90.0 0.9908 3.76 0.49 11.3 6 0 white 12 4.7 0.335 0.14 1.3 0.036 69.0 168.0 0.99212 3.47 0.46 10.5 5 0 white 13 4.7 0.455 0.18 1.9 0.036 33.0 106.0 0.98746 3.21 0.83 14.0 7 1 white 14 4.7 0.6 0.17 2.3 0.058 17.0 106.0 0.9932 3.85 0.6 12.9 6 0 red 15 4.7 0.67 0.09 1.0 0.02 5.0 9.0 0.98722 3.3 0.34 13.6 5 0 white 16 4.7 0.785 0.0 3.4 0.036 23.0 134.0 0.98981 3.53 0.92 13.8 6 0 white 17 4.8 0.13 0.32 1.2 0.042 40.0 98.0 0.9898 3.42 0.64 11.8 7 1 white 18 4.8 0.17 0.28 2.9 0.03 22.0 111.0 0.9902 3.38 0.34 11.3 7 1 white 19 4.8 0.21 0.21 10.2 0.037 17.0 112.0 0.99324 3.66 0.48 12.2 7 1 white 20 4.8 0.225 0.38 1.2 0.074 47.0 130.0 0.99132 3.31 0.4 10.3 6 0 white 21 4.8 0.26 0.23 10.6 0.034 23.0 111.0 0.99274 3.46 0.28 11.5 7 1 white 22 4.8 0.29 0.23 1.1 0.044 38.0 180.0 0.98924 3.28 0.34 11.9 6 0 white 23 4.8 0.33 0.0 6.5 0.028 34.0 163.0 0.9937 3.35 0.61 9.9 5 0 white 24 4.8 0.34 0.0 6.5 0.028 33.0 163.0 0.9939 3.36 0.61 9.9 6 0 white 25 4.8 0.65 0.12 1.1 0.013 4.0 10.0 0.99246 3.32 0.36 13.5 4 0 white 26 4.9 0.235 0.27 11.75 0.03 34.0 118.0 0.9954 3.07 0.5 9.4 6 0 white 27 4.9 0.33 0.31 1.2 0.016 39.0 150.0 0.98713 3.33 0.59 14.0 8 1 white 28 4.9 0.335 0.14 1.3 0.036 69.0 168.0 0.99212 3.47 0.46 10.4666666666667 5 0 white 29 4.9 0.335 0.14 1.3 0.036 69.0 168.0 0.99212 3.47 0.46 10.4666666666667 5 0 white 30 4.9 0.345 0.34 1.0 0.068 32.0 143.0 0.99138 3.24 0.4 10.1 5 0 white 31 4.9 0.345 0.34 1.0 0.068 32.0 143.0 0.99138 3.24 0.4 10.1 5 0 white 32 4.9 0.42 0.0 2.1 0.048 16.0 42.0 0.99154 3.71 0.74 14.0 7 1 red 33 4.9 0.47 0.17 1.9 0.035 60.0 148.0 0.98964 3.27 0.35 11.5 6 0 white 34 5.0 0.17 0.56 1.5 0.026 24.0 115.0 0.9906 3.48 0.39 10.8 7 1 white 35 5.0 0.2 0.4 1.9 0.015 20.0 98.0 0.9897 3.37 0.55 12.05 6 0 white 36 5.0 0.235 0.27 11.75 0.03 34.0 118.0 0.9954 3.07 0.5 9.4 6 0 white 37 5.0 0.24 0.19 5.0 0.043 17.0 101.0 0.99438 3.67 0.57 10.0 5 0 white 38 5.0 0.24 0.21 2.2 0.039 31.0 100.0 0.99098 3.69 0.62 11.7 6 0 white 39 5.0 0.24 0.34 1.1 0.034 49.0 158.0 0.98774 3.32 0.32 13.1 7 1 white 40 5.0 0.255 0.22 2.7 0.043 46.0 153.0 0.99238 3.75 0.76 11.3 6 0 white 41 5.0 0.27 0.32 4.5 0.032 58.0 178.0 0.98956 3.45 0.31 12.6 7 1 white 42 5.0 0.27 0.32 4.5 0.032 58.0 178.0 0.98956 3.45 0.31 12.6 7 1 white 43 5.0 0.27 0.4 1.2 0.076 42.0 124.0 0.99204 3.32 0.47 10.1 6 0 white 44 5.0 0.29 0.54 5.7 0.035 54.0 155.0 0.98976 3.27 0.34 12.9 8 1 white 45 5.0 0.3 0.33 3.7 0.03 54.0 173.0 0.9887 3.36 0.3 13.0 7 1 white 46 5.0 0.31 0.0 6.4 0.046 43.0 166.0 0.994 3.3 0.63 9.9 6 0 white 47 5.0 0.33 0.16 1.5 0.049 10.0 97.0 0.9917 3.48 0.44 10.7 6 0 white 48 5.0 0.33 0.16 1.5 0.049 10.0 97.0 0.9917 3.48 0.44 10.7 6 0 white 49 5.0 0.33 0.16 1.5 0.049 10.0 97.0 0.9917 3.48 0.44 10.7 6 0 white 50 5.0 0.33 0.18 4.6 0.032 40.0 124.0 0.99114 3.18 0.4 11.0 6 0 white 51 5.0 0.33 0.23 11.8 0.03 23.0 158.0 0.99322 3.41 0.64 11.8 6 0 white 52 5.0 0.35 0.25 7.8 0.031 24.0 116.0 0.99241 3.39 0.4 11.3 6 0 white 53 5.0 0.35 0.25 7.8 0.031 24.0 116.0 0.99241 3.39 0.4 11.3 6 0 white 54 5.0 0.38 0.01 1.6 0.048 26.0 60.0 0.99084 3.7 0.75 14.0 6 0 red 55 5.0 0.4 0.5 4.3 0.046 29.0 80.0 0.9902 3.49 0.66 13.6 6 0 red 56 5.0 0.42 0.24 2.0 0.06 19.0 50.0 0.9917 3.72 0.74 14.0 8 1 red 57 5.0 0.44 0.04 18.6 0.039 38.0 128.0 0.9985 3.37 0.57 10.2 6 0 white 58 5.0 0.455 0.18 1.9 0.036 33.0 106.0 0.98746 3.21 0.83 14.0 7 1 white 59 5.0 0.55 0.14 8.3 0.032 35.0 164.0 0.9918 3.53 0.51 12.5 8 1 white 60 5.0 0.61 0.12 1.3 0.009 65.0 100.0 0.9874 3.26 0.37 13.5 5 0 white 61 5.0 0.74 0.0 1.2 0.041 16.0 46.0 0.99258 4.01 0.59 12.5 6 0 red 62 5.0 1.02 0.04 1.4 0.045 41.0 85.0 0.9938 3.75 0.48 10.5 4 0 red 63 5.0 1.04 0.24 1.6 0.05 32.0 96.0 0.9934 3.74 0.62 11.5 5 0 red 64 5.1 0.11 0.32 1.6 0.028 12.0 90.0 0.99008 3.57 0.52 12.2 6 0 white 65 5.1 0.14 0.25 0.7 0.039 15.0 89.0 0.9919 3.22 0.43 9.2 6 0 white 66 5.1 0.165 0.22 5.7 0.047 42.0 146.0 0.9934 3.18 0.55 9.9 6 0 white 67 5.1 0.21 0.28 1.4 0.047 48.0 148.0 0.99168 3.5 0.49 10.4 5 0 white 68 5.1 0.23 0.18 1.0 0.053 13.0 99.0 0.98956 3.22 0.39 11.5 5 0 white 69 5.1 0.25 0.36 1.3 0.035 40.0 78.0 0.9891 3.23 0.64 12.1 7 1 white 70 5.1 0.26 0.33 1.1 0.027 46.0 113.0 0.98946 3.35 0.43 11.4 7 1 white 71 5.1 0.26 0.34 6.4 0.034 26.0 99.0 0.99449 3.23 0.41 9.2 6 0 white 72 5.1 0.29 0.28 8.3 0.026 27.0 107.0 0.99308 3.36 0.37 11.0 6 0 white 73 5.1 0.29 0.28 8.3 0.026 27.0 107.0 0.99308 3.36 0.37 11.0 6 0 white 74 5.1 0.3 0.3 2.3 0.048 40.0 150.0 0.98944 3.29 0.46 12.2 6 0 white 75 5.1 0.305 0.13 1.75 0.036 17.0 73.0 0.99 3.4 0.51 12.3333333333333 5 0 white 76 5.1 0.31 0.3 0.9 0.037 28.0 152.0 0.992 3.54 0.56 10.1 6 0 white 77 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 78 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 79 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 80 5.1 0.33 0.27 6.7 0.022 44.0 129.0 0.99221 3.36 0.39 11.0 7 1 white 81 5.1 0.35 0.26 6.8 0.034 36.0 120.0 0.99188 3.38 0.4 11.5 6 0 white 82 5.1 0.35 0.26 6.8 0.034 36.0 120.0 0.99188 3.38 0.4 11.5 6 0 white 83 5.1 0.35 0.26 6.8 0.034 36.0 120.0 0.99188 3.38 0.4 11.5 6 0 white 84 5.1 0.39 0.21 1.7 0.027 15.0 72.0 0.9894 3.5 0.45 12.5 6 0 white 85 5.1 0.42 0.0 1.8 0.044 18.0 88.0 0.99157 3.68 0.73 13.6 7 1 red 86 5.1 0.42 0.01 1.5 0.017 25.0 102.0 0.9894 3.38 0.36 12.3 7 1 white 87 5.1 0.47 0.02 1.3 0.034 18.0 44.0 0.9921 3.9 0.62 12.8 6 0 red 88 5.1 0.51 0.18 2.1 0.042 16.0 101.0 0.9924 3.46 0.87 12.9 7 1 red 89 5.1 0.52 0.06 2.7 0.052 30.0 79.0 0.9932 3.32 0.43 9.3 5 0 white 90 5.1 0.585 0.0 1.7 0.044 14.0 86.0 0.99264 3.56 0.94 12.9 7 1 red 91 5.2 0.155 0.33 1.6 0.028 13.0 59.0 0.98975 3.3 0.84 11.9 8 1 white 92 5.2 0.155 0.33 1.6 0.028 13.0 59.0 0.98975 3.3 0.84 11.9 8 1 white 93 5.2 0.16 0.34 0.8 0.029 26.0 77.0 0.99155 3.25 0.51 10.1 6 0 white 94 5.2 0.17 0.27 0.7 0.03 11.0 68.0 0.99218 3.3 0.41 9.8 5 0 white 95 5.2 0.185 0.22 1.0 0.03 47.0 123.0 0.99218 3.55 0.44 10.15 6 0 white 96 5.2 0.2 0.27 3.2 0.047 16.0 93.0 0.99235 3.44 0.53 10.1 7 1 white 97 5.2 0.21 0.31 1.7 0.048 17.0 61.0 0.98953 3.24 0.37 12.0 7 1 white 98 5.2 0.22 0.46 6.2 0.066 41.0 187.0 0.99362 3.19 0.42 9.73333333333333 5 0 white 99 5.2 0.24 0.15 7.1 0.043 32.0 134.0 0.99378 3.24 0.48 9.9 6 0 white 100 5.2 0.24 0.45 3.8 0.027 21.0 128.0 0.992 3.55 0.49 11.2 8 1 white Rows: 1-100 | Columns: 14Note
VerticaPy offers a wide range of sample datasets that are ideal for training and testing purposes. You can explore the full list of available datasets in the Datasets, which provides detailed information on each dataset and how to use them effectively. These datasets are invaluable resources for honing your data analysis and machine learning skills within the VerticaPy environment.
You can easily divide your dataset into training and testing subsets using the
vDataFrame.train_test_split()method. This is a crucial step when preparing your data for machine learning, as it allows you to evaluate the performance of your models accurately.data = vpd.load_winequality() train, test = data.train_test_split(test_size = 0.2)
Warning
In this case, VerticaPy utilizes seeded randomization to guarantee the reproducibility of your data split. However, please be aware that this approach may lead to reduced performance. For a more efficient data split, you can use the
vDataFrame.to_db()method to save your results intotablesortemporary tables. This will help enhance the overall performance of the process.Balancing the Dataset¶
In VerticaPy, balancing a dataset to address class imbalances is made straightforward through the
balance()function within thepreprocessingmodule. This function enables users to rectify skewed class distributions efficiently. By specifying the target variable and setting parameters like the method for balancing, users can effortlessly achieve a more equitable representation of classes in their dataset. Whether opting for over-sampling, under-sampling, or a combination of both, VerticaPy’sbalance()function streamlines the process, empowering users to enhance the performance and fairness of their machine learning models trained on imbalanced data.To balance the dataset, use the following syntax.
from verticapy.machine_learning.vertica.preprocessing import balance balanced_train = balance( name = "my_schema.train_balanced", input_relation = train, y = "good", method = "hybrid", )
Note
With this code, a table named train_balanced is created in the my_schema schema. It can then be used to train the model. In the rest of the example, we will work with the full dataset.
Hint
Balancing the dataset is a crucial step in improving the accuracy of machine learning models, particularly when faced with imbalanced class distributions. By addressing disparities in the number of instances across different classes, the model becomes more adept at learning patterns from all classes rather than being biased towards the majority class. This, in turn, enhances the model’s ability to make accurate predictions for under-represented classes. The balanced dataset ensures that the model is not dominated by the majority class and, as a result, leads to more robust and unbiased model performance. Therefore, by employing techniques such as over-sampling, under-sampling, or a combination of both during dataset preparation, practitioners can significantly contribute to achieving higher accuracy and better generalization of their machine learning models.
Model Initialization¶
First we import the
XGBClassifiermodel:from verticapy.machine_learning.vertica import XGBClassifier
Then we can create the model:
model = XGBClassifier( max_ntree = 3, max_depth = 3, nbins = 6, split_proposal_method = 'global', tol = 0.001, learning_rate = 0.1, min_split_loss = 0, weight_reg = 0, sample = 0.7, col_sample_by_tree = 1, col_sample_by_node = 1, )
Hint
In
verticapy1.0.x and higher, you do not need to specify the model name, as the name is automatically assigned. If you need to re-use the model, you can fetch the model name from the model’s attributes.Important
The model name is crucial for the model management system and versioning. It’s highly recommended to provide a name if you plan to reuse the model later.
Model Training¶
We can now fit the model:
model.fit( train, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "good", test, ) =========== call_string =========== xgb_classifier('"public"."_verticapy_tmp_xgbclassifier_v_demo_deb55a7255a311ef880f0242ac120002_"', '"public"."_verticapy_tmp_view_v_demo_dec233fa55a311ef880f0242ac120002_"', '"good"', '"fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density"' USING PARAMETERS exclude_columns='', max_ntree=3, max_depth=3, learning_rate=0.1, min_split_loss=0, weight_reg=0, nbins=6, objective=crossentropy, sampling_size=0.7, col_sample_by_tree=1, col_sample_by_node=1) ======= details ======= predictor | type ----------------+---------------- fixed_acidity |float or numeric volatile_acidity|float or numeric citric_acid |float or numeric residual_sugar |float or numeric chlorides |float or numeric density |float or numeric ================== initial_prediction ================== response_label| value --------------+-------- 0 | 0.00000 1 | 0.00000 =============== Additional Info =============== Name |Value ------------------+----- tree_count | 3 rejected_row_count| 0 accepted_row_count|5191
Important
To train a model, you can directly use the
vDataFrameor the name of the relation stored in the database. The test set is optional and is only used to compute the test metrics. Inverticapy, we don’t work usingXmatrices andyvectors. Instead, we work directly with lists of predictors and the response name.Features Importance¶
We can conveniently get the features importance:
result = model.features_importance()
Note
In models such as
XGBoost, feature importance is calculated using the average gain of each tree. To determine the final score, VerticaPy sums the scores of each tree, normalizes them and applies an activation function to scale them.Metrics¶
We can get the entire report using:
model.report()
value auc 0.6603672643146329 prc_auc 0.5093002878329209 accuracy 0.7963246554364471 log_loss 0.261086415021515 precision 0.0 recall 0.0 f1_score 0.0 mcc 0.0 informedness 0.0 markedness -0.20367534456355285 csi 0.0 Rows: 1-11 | Columns: 2Important
Most metrics are computed using a single SQL query, but some of them might require multiple SQL queries. Selecting only the necessary metrics in the report can help optimize performance. E.g.
model.report(metrics = ["auc", "accuracy"]).For classification models, we can easily modify the
cutoffto observe the effect on different metrics:model.report(cutoff = 0.2)
value auc 0.6603672643146329 prc_auc 0.5093002878329209 accuracy 0.20367534456355282 log_loss 0.261086415021515 precision 0.20367534456355282 recall 1.0 f1_score 0.33842239185750633 mcc 0.0 informedness 0.0 markedness -0.7963246554364471 csi 0.20367534456355282 Rows: 1-11 | Columns: 2You can also use the
score()function to compute any classification metric. The default metric is the accuracy:model.score() Out[3]: 0.7963246554364471
Prediction¶
Prediction is straight-forward:
model.predict( test, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "prediction", )
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolorAbcprediction1 4.2 0.17 0.36 1.8 0.029 93.0 161.0 0.98999 3.65 0.89 12.0 7 1 white 0 2 4.4 0.54 0.09 5.1 0.038 52.0 97.0 0.99022 3.41 0.4 12.2 7 1 white 0 3 4.7 0.145 0.29 1.0 0.042 35.0 90.0 0.9908 3.76 0.49 11.3 6 0 white 0 4 4.8 0.225 0.38 1.2 0.074 47.0 130.0 0.99132 3.31 0.4 10.3 6 0 white 0 5 4.8 0.26 0.23 10.6 0.034 23.0 111.0 0.99274 3.46 0.28 11.5 7 1 white 0 6 4.9 0.47 0.17 1.9 0.035 60.0 148.0 0.98964 3.27 0.35 11.5 6 0 white 0 7 5.0 0.24 0.34 1.1 0.034 49.0 158.0 0.98774 3.32 0.32 13.1 7 1 white 0 8 5.0 0.27 0.4 1.2 0.076 42.0 124.0 0.99204 3.32 0.47 10.1 6 0 white 0 9 5.0 0.33 0.16 1.5 0.049 10.0 97.0 0.9917 3.48 0.44 10.7 6 0 white 0 10 5.0 0.4 0.5 4.3 0.046 29.0 80.0 0.9902 3.49 0.66 13.6 6 0 red 0 11 5.0 0.55 0.14 8.3 0.032 35.0 164.0 0.9918 3.53 0.51 12.5 8 1 white 0 12 5.1 0.14 0.25 0.7 0.039 15.0 89.0 0.9919 3.22 0.43 9.2 6 0 white 0 13 5.1 0.35 0.26 6.8 0.034 36.0 120.0 0.99188 3.38 0.4 11.5 6 0 white 0 14 5.1 0.42 0.0 1.8 0.044 18.0 88.0 0.99157 3.68 0.73 13.6 7 1 red 0 15 5.2 0.17 0.27 0.7 0.03 11.0 68.0 0.99218 3.3 0.41 9.8 5 0 white 0 16 5.2 0.24 0.45 3.8 0.027 21.0 128.0 0.992 3.55 0.49 11.2 8 1 white 0 17 5.2 0.31 0.36 5.1 0.031 46.0 145.0 0.9897 3.14 0.31 12.4 7 1 white 0 18 5.2 0.44 0.04 1.4 0.036 43.0 119.0 0.9894 3.36 0.33 12.1 8 1 white 0 19 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 0 20 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 0 21 5.3 0.2 0.31 3.6 0.036 22.0 91.0 0.99278 3.41 0.5 9.8 6 0 white 0 22 5.3 0.26 0.23 5.15 0.034 48.0 160.0 0.9952 3.82 0.51 10.5 7 1 white 0 23 5.3 0.36 0.27 6.3 0.028 40.0 132.0 0.99186 3.37 0.4 11.6 6 0 white 0 24 5.4 0.205 0.16 12.55 0.051 31.0 115.0 0.99564 3.4 0.38 10.8 6 0 white 0 25 5.4 0.22 0.29 1.2 0.045 69.0 152.0 0.99178 3.76 0.63 11.0 7 1 white 0 26 5.4 0.29 0.38 1.2 0.029 31.0 132.0 0.98895 3.28 0.36 12.4 6 0 white 0 27 5.4 0.31 0.47 3.0 0.053 46.0 144.0 0.9931 3.29 0.76 10.0 5 0 white 0 28 5.4 0.46 0.15 2.1 0.026 29.0 130.0 0.98953 3.39 0.77 13.4 8 1 white 0 29 5.4 0.53 0.16 2.7 0.036 34.0 128.0 0.98856 3.2 0.53 13.2 8 1 white 0 30 5.4 0.53 0.16 2.7 0.036 34.0 128.0 0.98856 3.2 0.53 13.2 8 1 white 0 31 5.5 0.24 0.45 1.7 0.046 22.0 113.0 0.99224 3.22 0.48 10.0 5 0 white 0 32 5.5 0.29 0.3 1.1 0.022 20.0 110.0 0.98869 3.34 0.38 12.8 7 1 white 0 33 5.5 0.3 0.25 1.9 0.029 33.0 118.0 0.98972 3.36 0.66 12.5 6 0 white 0 34 5.5 0.335 0.3 2.5 0.071 27.0 128.0 0.9924 3.14 0.51 9.6 6 0 white 0 35 5.5 0.62 0.33 1.7 0.037 24.0 118.0 0.98758 3.15 0.39 13.55 6 0 white 0 36 5.6 0.13 0.27 4.8 0.028 22.0 104.0 0.9948 3.34 0.45 9.2 6 0 white 0 37 5.6 0.18 0.29 2.3 0.04 5.0 47.0 0.99126 3.07 0.45 10.1 4 0 white 0 38 5.6 0.18 0.3 10.2 0.028 28.0 131.0 0.9954 3.49 0.42 10.8 7 1 white 0 39 5.6 0.18 0.31 1.5 0.038 16.0 84.0 0.9924 3.34 0.58 10.1 6 0 white 0 40 5.6 0.18 0.58 1.25 0.034 29.0 129.0 0.98984 3.51 0.6 12.0 7 1 white 0 41 5.6 0.185 0.19 7.1 0.048 36.0 110.0 0.99438 3.26 0.41 9.5 6 0 white 0 42 5.6 0.19 0.27 0.9 0.04 52.0 103.0 0.99026 3.5 0.39 11.2 5 0 white 0 43 5.6 0.19 0.46 1.1 0.032 33.0 115.0 0.9909 3.36 0.5 10.4 6 0 white 0 44 5.6 0.21 0.24 4.4 0.027 37.0 150.0 0.991 3.3 0.31 11.5 7 1 white 0 45 5.6 0.23 0.25 8.0 0.043 31.0 101.0 0.99429 3.19 0.42 10.4 6 0 white 0 46 5.6 0.23 0.29 3.1 0.023 19.0 89.0 0.99068 3.25 0.51 11.2 6 0 white 0 47 5.6 0.245 0.25 9.7 0.032 12.0 68.0 0.994 3.31 0.34 10.5 5 0 white 0 48 5.6 0.245 0.32 1.1 0.047 24.0 152.0 0.9927 3.12 0.42 9.3 6 0 white 0 49 5.6 0.26 0.0 10.2 0.038 13.0 111.0 0.99315 3.44 0.46 12.4 6 0 white 0 50 5.6 0.26 0.18 1.4 0.034 18.0 135.0 0.99174 3.32 0.35 10.2 6 0 white 0 51 5.6 0.26 0.5 11.4 0.029 25.0 93.0 0.99428 3.23 0.49 10.5 6 0 white 0 52 5.6 0.3 0.1 6.4 0.043 34.0 142.0 0.99382 3.14 0.48 9.8 5 0 white 0 53 5.6 0.31 0.37 1.4 0.074 12.0 96.0 0.9954 3.32 0.58 9.2 5 0 red 0 54 5.6 0.34 0.1 1.3 0.031 20.0 68.0 0.9906 3.36 0.51 11.2 7 1 white 0 55 5.6 0.41 0.22 7.1 0.05 44.0 154.0 0.9931 3.3 0.4 10.5 5 0 white 0 56 5.6 0.46 0.24 4.8 0.042 24.0 72.0 0.9908 3.29 0.37 12.6 6 0 white 0 57 5.6 0.49 0.13 4.5 0.039 17.0 116.0 0.9907 3.42 0.9 13.7 7 1 white 0 58 5.7 0.18 0.26 2.2 0.023 21.0 95.0 0.9893 3.07 0.54 12.3 6 0 white 0 59 5.7 0.21 0.25 1.1 0.035 26.0 81.0 0.9902 3.31 0.52 11.4 6 0 white 0 60 5.7 0.22 0.22 16.65 0.044 39.0 110.0 0.99855 3.24 0.48 9.0 6 0 white 0 61 5.7 0.22 0.29 3.5 0.04 27.0 146.0 0.98999 3.17 0.36 12.1 6 0 white 0 62 5.7 0.23 0.28 9.65 0.025 26.0 121.0 0.9925 3.28 0.38 11.3 6 0 white 0 63 5.7 0.24 0.3 1.3 0.03 25.0 98.0 0.98968 3.37 0.43 12.4 7 1 white 0 64 5.7 0.24 0.47 6.3 0.069 35.0 182.0 0.99391 3.11 0.46 9.75 5 0 white 0 65 5.7 0.25 0.27 10.8 0.05 58.0 116.0 0.99592 3.1 0.5 9.8 6 0 white 0 66 5.7 0.255 0.65 1.2 0.079 17.0 137.0 0.99307 3.2 0.42 9.4 5 0 white 0 67 5.7 0.255 0.65 1.2 0.079 17.0 137.0 0.99307 3.2 0.42 9.4 5 0 white 0 68 5.7 0.26 0.24 17.8 0.059 23.0 124.0 0.99773 3.3 0.5 10.1 5 0 white 0 69 5.7 0.26 0.27 4.1 0.201 73.5 189.5 0.9942 3.27 0.38 9.4 6 0 white 0 70 5.7 0.265 0.28 6.9 0.036 46.0 150.0 0.99299 3.36 0.44 10.8 7 1 white 0 71 5.7 0.28 0.28 2.2 0.019 15.0 65.0 0.9902 3.06 0.52 11.2 6 0 white 0 72 5.7 0.335 0.34 1.0 0.04 13.0 174.0 0.992 3.27 0.66 10.0 5 0 white 0 73 5.7 0.41 0.21 1.9 0.048 30.0 112.0 0.99138 3.29 0.55 11.2 6 0 white 0 74 5.7 0.45 0.42 1.1 0.051 61.0 197.0 0.9932 3.02 0.4 9.0 5 0 white 0 75 5.7 1.13 0.09 1.5 0.172 7.0 19.0 0.994 3.5 0.48 9.8 4 0 red 0 76 5.8 0.13 0.22 12.7 0.058 24.0 183.0 0.9956 3.32 0.42 11.7 6 0 white 0 77 5.8 0.17 0.3 1.4 0.037 55.0 130.0 0.9909 3.29 0.38 11.3 6 0 white 0 78 5.8 0.17 0.36 1.3 0.036 11.0 70.0 0.99202 3.43 0.68 10.4 7 1 white 0 79 5.8 0.2 0.34 1.0 0.035 40.0 86.0 0.98993 3.5 0.42 11.7 5 0 white 0 80 5.8 0.21 0.32 1.6 0.045 38.0 95.0 0.98946 3.23 0.94 12.4 8 1 white 0 81 5.8 0.23 0.2 2.0 0.043 39.0 154.0 0.99226 3.21 0.39 10.2 6 0 white 0 82 5.8 0.24 0.28 1.4 0.038 40.0 76.0 0.98711 3.1 0.29 13.9 7 1 white 0 83 5.8 0.24 0.39 1.5 0.054 37.0 158.0 0.9932 3.21 0.52 9.3 6 0 white 0 84 5.8 0.24 0.44 3.5 0.029 5.0 109.0 0.9913 3.53 0.43 11.7 3 0 white 0 85 5.8 0.26 0.18 1.2 0.031 40.0 114.0 0.9908 3.42 0.4 11.0 7 1 white 0 86 5.8 0.26 0.18 1.2 0.031 40.0 114.0 0.9908 3.42 0.4 11.0 7 1 white 0 87 5.8 0.27 0.2 7.3 0.04 42.0 145.0 0.99442 3.15 0.48 9.8 5 0 white 0 88 5.8 0.27 0.4 1.2 0.076 47.0 130.0 0.99185 3.13 0.45 10.3 6 0 white 0 89 5.8 0.28 0.34 4.0 0.031 40.0 99.0 0.9896 3.39 0.39 12.8 7 1 white 0 90 5.8 0.28 0.66 9.1 0.039 26.0 159.0 0.9965 3.66 0.55 10.8 5 0 white 0 91 5.8 0.29 0.05 0.8 0.038 11.0 30.0 0.9924 3.36 0.35 9.2 5 0 white 0 92 5.8 0.29 0.15 1.1 0.029 12.0 83.0 0.9898 3.3 0.4 11.4 6 0 white 0 93 5.8 0.29 0.38 10.7 0.038 49.0 136.0 0.99366 3.11 0.59 11.2 6 0 white 0 94 5.8 0.31 0.31 7.5 0.052 55.0 230.0 0.9949 3.19 0.46 9.8 5 0 white 0 95 5.8 0.32 0.28 4.3 0.032 46.0 115.0 0.98946 3.16 0.57 13.0 8 1 white 0 96 5.8 0.34 0.21 6.6 0.04 50.0 167.0 0.9941 3.29 0.62 10.0 5 0 white 0 97 5.8 0.36 0.32 1.7 0.033 22.0 96.0 0.9898 3.03 0.38 11.2 6 0 white 0 98 5.8 0.38 0.26 1.1 0.058 20.0 140.0 0.99271 3.27 0.43 9.7 6 0 white 0 99 5.8 0.4 0.42 4.4 0.047 38.5 245.0 0.9937 3.25 0.57 9.6 6 0 white 0 100 5.8 0.58 0.0 1.5 0.02 33.0 96.0 0.98918 3.29 0.38 12.4 6 0 white 0 Rows: 1-100 | Columns: 15Note
Predictions can be made automatically using the test set, in which case you don’t need to specify the predictors. Alternatively, you can pass only the
vDataFrameto thepredict()function, but in this case, it’s essential that the column names of thevDataFramematch the predictors and response name in the model.Probabilities¶
It is also easy to get the model’s probabilities:
model.predict_proba( test, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "prediction", )
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolorAbcpredictionAbcprediction_0Abcprediction_11 4.2 0.17 0.36 1.8 0.029 93.0 161.0 0.98999 3.65 0.89 12.0 7 1 white 0 0.55312 0.44688 2 4.4 0.54 0.09 5.1 0.038 52.0 97.0 0.99022 3.41 0.4 12.2 7 1 white 0 0.585598 0.414402 3 4.7 0.145 0.29 1.0 0.042 35.0 90.0 0.9908 3.76 0.49 11.3 6 0 white 0 0.55312 0.44688 4 4.8 0.225 0.38 1.2 0.074 47.0 130.0 0.99132 3.31 0.4 10.3 6 0 white 0 0.55312 0.44688 5 4.8 0.26 0.23 10.6 0.034 23.0 111.0 0.99274 3.46 0.28 11.5 7 1 white 0 0.585598 0.414402 6 4.9 0.47 0.17 1.9 0.035 60.0 148.0 0.98964 3.27 0.35 11.5 6 0 white 0 0.585598 0.414402 7 5.0 0.24 0.34 1.1 0.034 49.0 158.0 0.98774 3.32 0.32 13.1 7 1 white 0 0.55312 0.44688 8 5.0 0.27 0.4 1.2 0.076 42.0 124.0 0.99204 3.32 0.47 10.1 6 0 white 0 0.55312 0.44688 9 5.0 0.33 0.16 1.5 0.049 10.0 97.0 0.9917 3.48 0.44 10.7 6 0 white 0 0.585598 0.414402 10 5.0 0.4 0.5 4.3 0.046 29.0 80.0 0.9902 3.49 0.66 13.6 6 0 red 0 0.55312 0.44688 11 5.0 0.55 0.14 8.3 0.032 35.0 164.0 0.9918 3.53 0.51 12.5 8 1 white 0 0.585598 0.414402 12 5.1 0.14 0.25 0.7 0.039 15.0 89.0 0.9919 3.22 0.43 9.2 6 0 white 0 0.585598 0.414402 13 5.1 0.35 0.26 6.8 0.034 36.0 120.0 0.99188 3.38 0.4 11.5 6 0 white 0 0.585598 0.414402 14 5.1 0.42 0.0 1.8 0.044 18.0 88.0 0.99157 3.68 0.73 13.6 7 1 red 0 0.585598 0.414402 15 5.2 0.17 0.27 0.7 0.03 11.0 68.0 0.99218 3.3 0.41 9.8 5 0 white 0 0.585598 0.414402 16 5.2 0.24 0.45 3.8 0.027 21.0 128.0 0.992 3.55 0.49 11.2 8 1 white 0 0.55312 0.44688 17 5.2 0.31 0.36 5.1 0.031 46.0 145.0 0.9897 3.14 0.31 12.4 7 1 white 0 0.55312 0.44688 18 5.2 0.44 0.04 1.4 0.036 43.0 119.0 0.9894 3.36 0.33 12.1 8 1 white 0 0.585598 0.414402 19 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 0 0.55312 0.44688 20 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 0 0.55312 0.44688 21 5.3 0.2 0.31 3.6 0.036 22.0 91.0 0.99278 3.41 0.5 9.8 6 0 white 0 0.55312 0.44688 22 5.3 0.26 0.23 5.15 0.034 48.0 160.0 0.9952 3.82 0.51 10.5 7 1 white 0 0.585598 0.414402 23 5.3 0.36 0.27 6.3 0.028 40.0 132.0 0.99186 3.37 0.4 11.6 6 0 white 0 0.585598 0.414402 24 5.4 0.205 0.16 12.55 0.051 31.0 115.0 0.99564 3.4 0.38 10.8 6 0 white 0 0.585598 0.414402 25 5.4 0.22 0.29 1.2 0.045 69.0 152.0 0.99178 3.76 0.63 11.0 7 1 white 0 0.55312 0.44688 26 5.4 0.29 0.38 1.2 0.029 31.0 132.0 0.98895 3.28 0.36 12.4 6 0 white 0 0.55312 0.44688 27 5.4 0.31 0.47 3.0 0.053 46.0 144.0 0.9931 3.29 0.76 10.0 5 0 white 0 0.55312 0.44688 28 5.4 0.46 0.15 2.1 0.026 29.0 130.0 0.98953 3.39 0.77 13.4 8 1 white 0 0.585598 0.414402 29 5.4 0.53 0.16 2.7 0.036 34.0 128.0 0.98856 3.2 0.53 13.2 8 1 white 0 0.585598 0.414402 30 5.4 0.53 0.16 2.7 0.036 34.0 128.0 0.98856 3.2 0.53 13.2 8 1 white 0 0.585598 0.414402 31 5.5 0.24 0.45 1.7 0.046 22.0 113.0 0.99224 3.22 0.48 10.0 5 0 white 0 0.55312 0.44688 32 5.5 0.29 0.3 1.1 0.022 20.0 110.0 0.98869 3.34 0.38 12.8 7 1 white 0 0.55312 0.44688 33 5.5 0.3 0.25 1.9 0.029 33.0 118.0 0.98972 3.36 0.66 12.5 6 0 white 0 0.585598 0.414402 34 5.5 0.335 0.3 2.5 0.071 27.0 128.0 0.9924 3.14 0.51 9.6 6 0 white 0 0.55312 0.44688 35 5.5 0.62 0.33 1.7 0.037 24.0 118.0 0.98758 3.15 0.39 13.55 6 0 white 0 0.55312 0.44688 36 5.6 0.13 0.27 4.8 0.028 22.0 104.0 0.9948 3.34 0.45 9.2 6 0 white 0 0.585598 0.414402 37 5.6 0.18 0.29 2.3 0.04 5.0 47.0 0.99126 3.07 0.45 10.1 4 0 white 0 0.55312 0.44688 38 5.6 0.18 0.3 10.2 0.028 28.0 131.0 0.9954 3.49 0.42 10.8 7 1 white 0 0.55312 0.44688 39 5.6 0.18 0.31 1.5 0.038 16.0 84.0 0.9924 3.34 0.58 10.1 6 0 white 0 0.55312 0.44688 40 5.6 0.18 0.58 1.25 0.034 29.0 129.0 0.98984 3.51 0.6 12.0 7 1 white 0 0.55312 0.44688 41 5.6 0.185 0.19 7.1 0.048 36.0 110.0 0.99438 3.26 0.41 9.5 6 0 white 0 0.585598 0.414402 42 5.6 0.19 0.27 0.9 0.04 52.0 103.0 0.99026 3.5 0.39 11.2 5 0 white 0 0.585598 0.414402 43 5.6 0.19 0.46 1.1 0.032 33.0 115.0 0.9909 3.36 0.5 10.4 6 0 white 0 0.55312 0.44688 44 5.6 0.21 0.24 4.4 0.027 37.0 150.0 0.991 3.3 0.31 11.5 7 1 white 0 0.585598 0.414402 45 5.6 0.23 0.25 8.0 0.043 31.0 101.0 0.99429 3.19 0.42 10.4 6 0 white 0 0.585598 0.414402 46 5.6 0.23 0.29 3.1 0.023 19.0 89.0 0.99068 3.25 0.51 11.2 6 0 white 0 0.55312 0.44688 47 5.6 0.245 0.25 9.7 0.032 12.0 68.0 0.994 3.31 0.34 10.5 5 0 white 0 0.585598 0.414402 48 5.6 0.245 0.32 1.1 0.047 24.0 152.0 0.9927 3.12 0.42 9.3 6 0 white 0 0.55312 0.44688 49 5.6 0.26 0.0 10.2 0.038 13.0 111.0 0.99315 3.44 0.46 12.4 6 0 white 0 0.585598 0.414402 50 5.6 0.26 0.18 1.4 0.034 18.0 135.0 0.99174 3.32 0.35 10.2 6 0 white 0 0.585598 0.414402 51 5.6 0.26 0.5 11.4 0.029 25.0 93.0 0.99428 3.23 0.49 10.5 6 0 white 0 0.55312 0.44688 52 5.6 0.3 0.1 6.4 0.043 34.0 142.0 0.99382 3.14 0.48 9.8 5 0 white 0 0.585598 0.414402 53 5.6 0.31 0.37 1.4 0.074 12.0 96.0 0.9954 3.32 0.58 9.2 5 0 red 0 0.55312 0.44688 54 5.6 0.34 0.1 1.3 0.031 20.0 68.0 0.9906 3.36 0.51 11.2 7 1 white 0 0.585598 0.414402 55 5.6 0.41 0.22 7.1 0.05 44.0 154.0 0.9931 3.3 0.4 10.5 5 0 white 0 0.585598 0.414402 56 5.6 0.46 0.24 4.8 0.042 24.0 72.0 0.9908 3.29 0.37 12.6 6 0 white 0 0.585598 0.414402 57 5.6 0.49 0.13 4.5 0.039 17.0 116.0 0.9907 3.42 0.9 13.7 7 1 white 0 0.585598 0.414402 58 5.7 0.18 0.26 2.2 0.023 21.0 95.0 0.9893 3.07 0.54 12.3 6 0 white 0 0.585598 0.414402 59 5.7 0.21 0.25 1.1 0.035 26.0 81.0 0.9902 3.31 0.52 11.4 6 0 white 0 0.585598 0.414402 60 5.7 0.22 0.22 16.65 0.044 39.0 110.0 0.99855 3.24 0.48 9.0 6 0 white 0 0.605757 0.394243 61 5.7 0.22 0.29 3.5 0.04 27.0 146.0 0.98999 3.17 0.36 12.1 6 0 white 0 0.55312 0.44688 62 5.7 0.23 0.28 9.65 0.025 26.0 121.0 0.9925 3.28 0.38 11.3 6 0 white 0 0.55312 0.44688 63 5.7 0.24 0.3 1.3 0.03 25.0 98.0 0.98968 3.37 0.43 12.4 7 1 white 0 0.55312 0.44688 64 5.7 0.24 0.47 6.3 0.069 35.0 182.0 0.99391 3.11 0.46 9.75 5 0 white 0 0.55312 0.44688 65 5.7 0.25 0.27 10.8 0.05 58.0 116.0 0.99592 3.1 0.5 9.8 6 0 white 0 0.605757 0.394243 66 5.7 0.255 0.65 1.2 0.079 17.0 137.0 0.99307 3.2 0.42 9.4 5 0 white 0 0.55312 0.44688 67 5.7 0.255 0.65 1.2 0.079 17.0 137.0 0.99307 3.2 0.42 9.4 5 0 white 0 0.55312 0.44688 68 5.7 0.26 0.24 17.8 0.059 23.0 124.0 0.99773 3.3 0.5 10.1 5 0 white 0 0.605757 0.394243 69 5.7 0.26 0.27 4.1 0.201 73.5 189.5 0.9942 3.27 0.38 9.4 6 0 white 0 0.585598 0.414402 70 5.7 0.265 0.28 6.9 0.036 46.0 150.0 0.99299 3.36 0.44 10.8 7 1 white 0 0.55312 0.44688 71 5.7 0.28 0.28 2.2 0.019 15.0 65.0 0.9902 3.06 0.52 11.2 6 0 white 0 0.55312 0.44688 72 5.7 0.335 0.34 1.0 0.04 13.0 174.0 0.992 3.27 0.66 10.0 5 0 white 0 0.55312 0.44688 73 5.7 0.41 0.21 1.9 0.048 30.0 112.0 0.99138 3.29 0.55 11.2 6 0 white 0 0.585598 0.414402 74 5.7 0.45 0.42 1.1 0.051 61.0 197.0 0.9932 3.02 0.4 9.0 5 0 white 0 0.55312 0.44688 75 5.7 1.13 0.09 1.5 0.172 7.0 19.0 0.994 3.5 0.48 9.8 4 0 red 0 0.585598 0.414402 76 5.8 0.13 0.22 12.7 0.058 24.0 183.0 0.9956 3.32 0.42 11.7 6 0 white 0 0.585598 0.414402 77 5.8 0.17 0.3 1.4 0.037 55.0 130.0 0.9909 3.29 0.38 11.3 6 0 white 0 0.55312 0.44688 78 5.8 0.17 0.36 1.3 0.036 11.0 70.0 0.99202 3.43 0.68 10.4 7 1 white 0 0.55312 0.44688 79 5.8 0.2 0.34 1.0 0.035 40.0 86.0 0.98993 3.5 0.42 11.7 5 0 white 0 0.55312 0.44688 80 5.8 0.21 0.32 1.6 0.045 38.0 95.0 0.98946 3.23 0.94 12.4 8 1 white 0 0.55312 0.44688 81 5.8 0.23 0.2 2.0 0.043 39.0 154.0 0.99226 3.21 0.39 10.2 6 0 white 0 0.585598 0.414402 82 5.8 0.24 0.28 1.4 0.038 40.0 76.0 0.98711 3.1 0.29 13.9 7 1 white 0 0.55312 0.44688 83 5.8 0.24 0.39 1.5 0.054 37.0 158.0 0.9932 3.21 0.52 9.3 6 0 white 0 0.55312 0.44688 84 5.8 0.24 0.44 3.5 0.029 5.0 109.0 0.9913 3.53 0.43 11.7 3 0 white 0 0.55312 0.44688 85 5.8 0.26 0.18 1.2 0.031 40.0 114.0 0.9908 3.42 0.4 11.0 7 1 white 0 0.585598 0.414402 86 5.8 0.26 0.18 1.2 0.031 40.0 114.0 0.9908 3.42 0.4 11.0 7 1 white 0 0.585598 0.414402 87 5.8 0.27 0.2 7.3 0.04 42.0 145.0 0.99442 3.15 0.48 9.8 5 0 white 0 0.585598 0.414402 88 5.8 0.27 0.4 1.2 0.076 47.0 130.0 0.99185 3.13 0.45 10.3 6 0 white 0 0.55312 0.44688 89 5.8 0.28 0.34 4.0 0.031 40.0 99.0 0.9896 3.39 0.39 12.8 7 1 white 0 0.55312 0.44688 90 5.8 0.28 0.66 9.1 0.039 26.0 159.0 0.9965 3.66 0.55 10.8 5 0 white 0 0.595698 0.404302 91 5.8 0.29 0.05 0.8 0.038 11.0 30.0 0.9924 3.36 0.35 9.2 5 0 white 0 0.585598 0.414402 92 5.8 0.29 0.15 1.1 0.029 12.0 83.0 0.9898 3.3 0.4 11.4 6 0 white 0 0.585598 0.414402 93 5.8 0.29 0.38 10.7 0.038 49.0 136.0 0.99366 3.11 0.59 11.2 6 0 white 0 0.55312 0.44688 94 5.8 0.31 0.31 7.5 0.052 55.0 230.0 0.9949 3.19 0.46 9.8 5 0 white 0 0.55312 0.44688 95 5.8 0.32 0.28 4.3 0.032 46.0 115.0 0.98946 3.16 0.57 13.0 8 1 white 0 0.55312 0.44688 96 5.8 0.34 0.21 6.6 0.04 50.0 167.0 0.9941 3.29 0.62 10.0 5 0 white 0 0.585598 0.414402 97 5.8 0.36 0.32 1.7 0.033 22.0 96.0 0.9898 3.03 0.38 11.2 6 0 white 0 0.55312 0.44688 98 5.8 0.38 0.26 1.1 0.058 20.0 140.0 0.99271 3.27 0.43 9.7 6 0 white 0 0.585598 0.414402 99 5.8 0.4 0.42 4.4 0.047 38.5 245.0 0.9937 3.25 0.57 9.6 6 0 white 0 0.55312 0.44688 100 5.8 0.58 0.0 1.5 0.02 33.0 96.0 0.98918 3.29 0.38 12.4 6 0 white 0 0.585598 0.414402 Rows: 1-100 | Columns: 17Note
Probabilities are added to the
vDataFrame, and VerticaPy uses the corresponding probability function in SQL behind the scenes. You can use thepos_labelparameter to add only the probability of the selected category.Confusion Matrix¶
You can obtain the confusion matrix of your choice by specifying the desired cutoff.
model.confusion_matrix(cutoff = 0.5) Out[4]: array([[1040, 0], [ 266, 0]])
Note
In classification, the
cutoffis a threshold value used to determine class assignment based on predicted probabilities or scores from a classification model. In binary classification, if the predicted probability for a specific class is greater than or equal to the cutoff, the instance is assigned to the positive class; otherwise, it is assigned to the negative class. Adjusting the cutoff allows for trade-offs between true positives and false positives, enabling the model to be optimized for specific objectives or to consider the relative costs of different classification errors. The choice of cutoff is critical for tailoring the model’s performance to meet specific needs.Main Plots (Classification Curves)¶
Classification models allow for the creation of various plots that are very helpful in understanding the model, such as the ROC Curve, PRC Curve, Cutoff Curve, Gain Curve, and more.
Most of the classification curves can be found in the Machine Learning - Classification Curve.
For example, let’s draw the model’s ROC curve.
model.roc_curve()
Important
Most of the curves have a parameter called
nbins, which is essential for estimating metrics. The larger thenbins, the more precise the estimation, but it can significantly impact performance. Exercise caution when increasing this parameter excessively.Hint
In binary classification, various curves can be easily plotted. However, in multi-class classification, it’s important to select the
pos_label, representing the class to be treated as positive when drawing the curve.Other Plots¶
Tree models can be visualized by drawing their tree plots. For more examples, check out Machine Learning - Tree Plots.
model.plot_tree()
Note
The above example may not render properly in the doc because of the huge size of the tree. But it should render nicely in jupyter environment.
In order to plot graph using graphviz separately, you can extract the graphviz DOT file code as follows:
model.to_graphviz() Out[5]: 'digraph Tree {\ngraph [bgcolor="#FFFFFFDD"];\n0 [label="\\"density\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n0 -> 1 [label="<= 0.995772", color="#000000", fontcolor="#000000"]\n0 -> 2 [label="> 0.995772", color="#000000", fontcolor="#000000"]\n1 [label="\\"citric_acid\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n1 -> 3 [label="<= 0.276667", color="#000000", fontcolor="#000000"]\n1 -> 4 [label="> 0.276667", color="#000000", fontcolor="#000000"]\n2 [label="\\"citric_acid\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n2 -> 5 [label="<= 0.276667", color="#000000", fontcolor="#000000"]\n2 -> 6 [label="> 0.276667", color="#000000", fontcolor="#000000"]\n3 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.29</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.29</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n4 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 0.8</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -0.8</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n5 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.89</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.89</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n6 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.47</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.47</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n}'
This string can then be copied into a DOT file which can beparsed by graphviz.
Contour plot is another useful plot that can be produced for models with two predictors.
model.contour()
Important
Machine learning models with two predictors can usually benefit from their own contour plot. This visual representation aids in exploring predictions and gaining a deeper understanding of how these models perform in different scenarios. Please refer to Contour Plot for more examples.
Parameter Modification¶
In order to see the parameters:
model.get_params() Out[6]: {'max_ntree': 3, 'max_depth': 3, 'nbins': 6, 'split_proposal_method': 'global', 'tol': 0.001, 'learning_rate': 0.1, 'min_split_loss': 0, 'weight_reg': 0, 'sample': 0.7, 'col_sample_by_tree': 1, 'col_sample_by_node': 1}
And to manually change some of the parameters:
model.set_params({'max_depth': 5})
Model Register¶
In order to register the model for tracking and versioning:
model.register("model_v1")
Please refer to Model Tracking and Versioning for more details on model tracking and versioning.
Model Exporting¶
To Memmodel
model.to_memmodel()
Note
MemModelobjects serve as in-memory representations of machine learning models. They can be used for both in-database and in-memory prediction tasks. These objects can be pickled in the same way that you would pickle ascikit-learnmodel.The preceding methods for exporting the model use
MemModel, and it is recommended to useMemModeldirectly.To SQL
You can get the SQL query equivalent of the XGB model by:
model.to_sql() Out[8]: '(CASE WHEN (1 / (1 + EXP(- (-1.419371306498331 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.28877 ELSE -0.797495 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN -1.8855 ELSE -1.46609 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.14543 ELSE -0.699181 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.24376 ELSE -1.56878 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.02379 ELSE -0.636177 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.16587 ELSE -1.49452 END) END)))))) / ((1 / (1 + EXP(- (1.419371306498331 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.28877 ELSE 0.797495 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN 1.8855 ELSE 1.46609 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.14543 ELSE 0.699181 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN 1.24376 ELSE 1.56878 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.02379 ELSE 0.636177 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN 1.16587 ELSE 1.49452 END) END)))))) + (1 / (1 + EXP(- (-1.419371306498331 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.28877 ELSE -0.797495 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN -1.8855 ELSE -1.46609 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.14543 ELSE -0.699181 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.24376 ELSE -1.56878 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.02379 ELSE -0.636177 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.16587 ELSE -1.49452 END) END))))))) > 0.5 THEN 1 ELSE 0 END)'
Note
This SQL query can be directly used in any database.
Deploy SQL
To get the SQL query which uses Vertica functions use below:
model.deploySQL() Out[9]: 'PREDICT_XGB_CLASSIFIER("fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density" USING PARAMETERS model_name = \'"public"."_verticapy_tmp_xgbclassifier_v_demo_deb55a7255a311ef880f0242ac120002_"\', match_by_pos = \'true\')'
To Python
To obtain the prediction function in Python syntax, use the following code:
X = [[4.2, 0.17, 0.36, 1.8, 0.029, 0.9899]] model.to_python()(X) Out[11]: array([0])
Hint
The
to_python()method is used to retrieve predictions, probabilities, or cluster distances. For specific details on how to use this method for different model types, refer to the relevant documentation for each model.- __init__(name: str = None, overwrite_model: bool = False, max_ntree: int = 10, max_depth: int = 5, nbins: int = 32, split_proposal_method: Literal['local', 'global'] = 'global', tol: float = 0.001, learning_rate: float = 0.1, min_split_loss: float = 0.0, weight_reg: float = 0.0, sample: float = 1.0, col_sample_by_tree: float = 1.0, col_sample_by_node: float = 1.0) None¶
Must be overridden in the child class
Methods
__init__([name, overwrite_model, max_ntree, ...])Must be overridden in the child class
classification_report([metrics, cutoff, ...])Computes a classification report using multiple model evaluation metrics (
auc,accuracy,f1...).confusion_matrix([pos_label, cutoff])Computes the model confusion matrix.
contour([pos_label, nbins, chart])Draws the model's contour plot.
cutoff_curve([pos_label, nbins, show, chart])Draws the model Cutoff curve.
deploySQL([X, pos_label, cutoff, allSQL])Returns the SQL code needed to deploy the model.
does_model_exists(name[, raise_error, ...])Checks whether the model is stored in the Vertica database.
drop()Drops the model from the Vertica database.
export_models(name, path[, kind])Exports machine learning models.
features_importance([tree_id, show, chart])Computes the model's features importance.
fit(input_relation, X, y[, test_relation, ...])Trains the model.
get_attributes([attr_name])Returns the model attributes.
get_match_index(x, col_list[, str_check])Returns the matching index.
Returns the parameters of the model.
get_plotting_lib([class_name, chart, ...])Returns the first available library (Plotly, Matplotlib, or Highcharts) to draw a specific graphic.
get_score([tree_id])Returns the feature importance metrics for the input tree.
get_tree([tree_id])Returns a table with all the input tree information.
get_vertica_attributes([attr_name])Returns the model Vertica attributes.
import_models(path[, schema, kind])Imports machine learning models.
lift_chart([pos_label, nbins, show, chart])Draws the model Lift Chart.
plot([max_nb_points, chart])Draws the model.
plot_tree([tree_id, pic_path])Draws the input tree.
prc_curve([pos_label, nbins, show, chart])Draws the model PRC curve.
predict(vdf[, X, name, cutoff, inplace])Predicts using the input relation.
predict_proba(vdf[, X, name, pos_label, inplace])Returns the model's probabilities using the input relation.
register(registered_name[, raise_error])Registers the model and adds it to in-DB Model versioning environment with a status of 'under_review'.
report([metrics, cutoff, labels, nbins])Computes a classification report using multiple model evaluation metrics (
auc,accuracy,f1...).roc_curve([pos_label, nbins, show, chart])Draws the model ROC curve.
score([metric, average, pos_label, cutoff, ...])Computes the model score.
set_params([parameters])Sets the parameters of the model.
Summarizes the model.
to_binary(path)Exports the model to the Vertica Binary format.
to_graphviz([tree_id, classes_color, ...])Returns the code for a Graphviz tree.
to_json([path])Creates a Python
XGBoostJSON fileConverts the model to an InMemory object that can be used for different types of predictions.
to_pmml(path)Exports the model to PMML.
to_python([return_proba, ...])Returns the Python function needed for in-memory scoring without using built-in Vertica functions.
to_sql([X, return_proba, ...])Returns the SQL code needed to deploy the model without using built-in Vertica functions.
to_tf(path)Exports the model to the Frozen Graph format (TensorFlow).
Attributes