verticapy.machine_learning.vertica.ensemble.XGBClassifier¶
- class verticapy.machine_learning.vertica.ensemble.XGBClassifier(name: str = None, overwrite_model: bool = False, max_ntree: int = 10, max_depth: int = 5, nbins: int = 32, split_proposal_method: Literal['local', 'global'] = 'global', tol: float = 0.001, learning_rate: float = 0.1, min_split_loss: float = 0.0, weight_reg: float = 0.0, sample: float = 1.0, col_sample_by_tree: float = 1.0, col_sample_by_node: float = 1.0)¶
Creates an
XGBClassifierobject using the Vertica XGB_CLASSIFIER algorithm.Parameters¶
- name: str, optional
Name of the model. The model is stored in the DB.
- overwrite_model: bool, optional
If set to
True, training a model with the same name as an existing model overwrites the existing model.- max_ntree: int, optional
Maximum number of trees that can be created.
- max_depth: int, optional
aximum depth of each tree, an
integerbetween1and20, inclusive.- nbins: int, optional
Number of bins used to find splits in each column, where more splits leads to a longer runtime but more fine-grained, possibly better splits. Must be an
integerbetween2and1000, inclusive.- split_proposal_method: str, optional
Approximate splitting strategy, either
globalorlocal(not yet supported).- tol: float, optional
Approximation error of quantile summary structures used in the approximate split finding method.
- learning_rate: float, optional
Weight applied to each tree’s prediction. This reduces each tree’s impact, allowing for later trees to contribute and keeping earlier trees from dominating.
- min_split_loss: float, optional
Each split must improve the model’s objective function value by at least this much in order to avoid pruning. A value of
0is the same as turning off this parameter (trees are still pruned based on positive / negative objective function values).- weight_reg: float, optional
Regularization term that is applied to the weights of the leaves in the regression tree. A higher value leads to more sparse/smooth weights, which often helps to prevent overfitting.
- sample: float, optional
Fraction of rows used per iteration in training.
- col_sample_by_tree: float, optional
floatin the range(0,1]that specifies the fraction of columns (features), chosen at random, to use when building each tree.- col_sample_by_node: float, optional
floatin the range(0,1]that specifies the fraction of columns (features), chosen at random, to use when evaluating each split.
Attributes¶
Many attributes are created during the fitting phase.
- trees_: list of BinaryTreeClassifier
Tree models are instances of `
BinaryTreeClassifier, each possessing various attributes. For more detailed information, refer to the documentation forBinaryTreeClassifier.- features_importance_: numpy.array
The importance of features. It is calculated using the average gain of each tree. To determine the final score, VerticaPy sums the scores of each tree, normalizes them and applies an activation function to scale them. It is necessary to use the
features_importance()method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.- features_importance_trees_: dict of numpy.array
Each element of the array represents the feature importance of tree i. The importance of features is calculated using the average gain of each tree. It is necessary to use the
features_importance()method to compute it initially, and the computed values will be subsequently utilized for subsequent calls.- logodds_: numpy.array
The log-odds. It quantifies the logarithm of the odds ratio, providing a measure of the likelihood of an event occurring.
- eta_: float
The learning rate, is a crucial hyperparameter in machine learning algorithms. It determines the step size at each iteration during the model training process. A well-chosen learning rate is essential for achieving optimal convergence and preventing overshooting or slow convergence in the training phase. Adjusting the learning rate is often necessary to strike a balance between model accuracy and computational efficiency.
- n_estimators_: int
The number of model estimators.
- classes_: numpy.array
The classes labels.
Note
All attributes can be accessed using the
get_attributes()method.Note
Several other attributes can be accessed by using the
get_vertica_attributes()method.Examples¶
The following examples provide a basic understanding of usage. For more detailed examples, please refer to the Machine Learning or the Examples section on the website.
Important
Many tree-based models inherit from the
XGBbase class, and it’s recommended to use it directly for access to a wider range of options.Load data for machine learning¶
We import
verticapy:import verticapy as vp
Hint
By assigning an alias to
verticapy, we mitigate the risk of code collisions with other libraries. This precaution is necessary because verticapy uses commonly known function names like “average” and “median”, which can potentially lead to naming conflicts. The use of an alias ensures that the functions fromverticapyare used as intended without interfering with functions from other libraries.For this example, we will use the winequality dataset.
import verticapy.datasets as vpd data = vpd.load_winequality()
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolor1 3.9 0.225 0.4 4.2 0.03 29.0 118.0 0.989 3.57 0.36 12.8 8 1 white 2 4.7 0.335 0.14 1.3 0.036 69.0 168.0 0.99212 3.47 0.46 10.5 5 0 white 3 4.7 0.455 0.18 1.9 0.036 33.0 106.0 0.98746 3.21 0.83 14.0 7 1 white 4 4.7 0.785 0.0 3.4 0.036 23.0 134.0 0.98981 3.53 0.92 13.8 6 0 white 5 4.9 0.345 0.34 1.0 0.068 32.0 143.0 0.99138 3.24 0.4 10.1 5 0 white 6 4.9 0.345 0.34 1.0 0.068 32.0 143.0 0.99138 3.24 0.4 10.1 5 0 white 7 4.9 0.42 0.0 2.1 0.048 16.0 42.0 0.99154 3.71 0.74 14.0 7 1 red 8 5.0 0.27 0.4 1.2 0.076 42.0 124.0 0.99204 3.32 0.47 10.1 6 0 white 9 5.0 0.31 0.0 6.4 0.046 43.0 166.0 0.994 3.3 0.63 9.9 6 0 white 10 5.0 0.4 0.5 4.3 0.046 29.0 80.0 0.9902 3.49 0.66 13.6 6 0 red 11 5.0 0.44 0.04 18.6 0.039 38.0 128.0 0.9985 3.37 0.57 10.2 6 0 white 12 5.1 0.11 0.32 1.6 0.028 12.0 90.0 0.99008 3.57 0.52 12.2 6 0 white 13 5.1 0.14 0.25 0.7 0.039 15.0 89.0 0.9919 3.22 0.43 9.2 6 0 white 14 5.1 0.165 0.22 5.7 0.047 42.0 146.0 0.9934 3.18 0.55 9.9 6 0 white 15 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 16 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 17 5.1 0.33 0.22 1.6 0.027 18.0 89.0 0.9893 3.51 0.38 12.5 7 1 white 18 5.1 0.39 0.21 1.7 0.027 15.0 72.0 0.9894 3.5 0.45 12.5 6 0 white 19 5.2 0.2 0.27 3.2 0.047 16.0 93.0 0.99235 3.44 0.53 10.1 7 1 white 20 5.2 0.21 0.31 1.7 0.048 17.0 61.0 0.98953 3.24 0.37 12.0 7 1 white 21 5.2 0.22 0.46 6.2 0.066 41.0 187.0 0.99362 3.19 0.42 9.73333333333333 5 0 white 22 5.2 0.31 0.2 2.4 0.027 27.0 117.0 0.98886 3.56 0.45 13.0 7 1 white 23 5.2 0.32 0.25 1.8 0.103 13.0 50.0 0.9957 3.38 0.55 9.2 5 0 red 24 5.2 0.34 0.37 6.2 0.031 42.0 133.0 0.99076 3.25 0.41 12.5 6 0 white 25 5.2 0.36 0.02 1.6 0.031 24.0 104.0 0.9896 3.44 0.35 12.2 6 0 white 26 5.2 0.365 0.08 13.5 0.041 37.0 142.0 0.997 3.46 0.39 9.9 6 0 white 27 5.2 0.48 0.04 1.6 0.054 19.0 106.0 0.9927 3.54 0.62 12.2 7 1 red 28 5.2 0.5 0.18 2.0 0.036 23.0 129.0 0.98949 3.36 0.77 13.4 7 1 white 29 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 30 5.3 0.16 0.39 1.0 0.028 40.0 101.0 0.99156 3.57 0.59 10.6 6 0 white 31 5.3 0.165 0.24 1.1 0.051 25.0 105.0 0.9925 3.32 0.47 9.1 5 0 white 32 5.3 0.23 0.56 0.9 0.041 46.0 141.0 0.99119 3.16 0.62 9.7 5 0 white 33 5.3 0.3 0.3 1.2 0.029 25.0 93.0 0.98742 3.31 0.4 13.6 7 1 white 34 5.3 0.33 0.3 1.2 0.048 25.0 119.0 0.99045 3.32 0.62 11.3 6 0 white 35 5.3 0.36 0.27 6.3 0.028 40.0 132.0 0.99186 3.37 0.4 11.6 6 0 white 36 5.3 0.36 0.27 6.3 0.028 40.0 132.0 0.99186 3.37 0.4 11.6 6 0 white 37 5.3 0.4 0.25 3.9 0.031 45.0 130.0 0.99072 3.31 0.58 11.75 7 1 white 38 5.3 0.47 0.11 2.2 0.048 16.0 89.0 0.99182 3.54 0.88 13.6 7 1 red 39 5.3 0.47 0.11 2.2 0.048 16.0 89.0 0.99182 3.54 0.88 13.5666666666667 7 1 red 40 5.3 0.715 0.19 1.5 0.161 7.0 62.0 0.99395 3.62 0.61 11.0 5 0 red 41 5.4 0.22 0.29 1.2 0.045 69.0 152.0 0.99178 3.76 0.63 11.0 7 1 white 42 5.4 0.595 0.1 2.8 0.042 26.0 80.0 0.9932 3.36 0.38 9.3 5 0 white 43 5.4 0.74 0.09 1.7 0.089 16.0 26.0 0.99402 3.67 0.56 11.6 6 0 red 44 5.5 0.12 0.33 1.0 0.038 23.0 131.0 0.99164 3.25 0.45 9.8 5 0 white 45 5.5 0.12 0.33 1.0 0.038 23.0 131.0 0.99164 3.25 0.45 9.8 5 0 white 46 5.5 0.14 0.27 4.6 0.029 22.0 104.0 0.9949 3.34 0.44 9.0 5 0 white 47 5.5 0.14 0.27 4.6 0.029 22.0 104.0 0.9949 3.34 0.44 9.0 5 0 white 48 5.5 0.16 0.31 1.2 0.026 31.0 68.0 0.9898 3.33 0.44 11.65 6 0 white 49 5.5 0.16 0.31 1.2 0.026 31.0 68.0 0.9898 3.33 0.44 11.6333333333333 6 0 white 50 5.5 0.18 0.22 5.5 0.037 10.0 86.0 0.99156 3.46 0.44 12.2 5 0 white 51 5.5 0.24 0.45 1.7 0.046 22.0 113.0 0.99224 3.22 0.48 10.0 5 0 white 52 5.5 0.29 0.3 1.1 0.022 20.0 110.0 0.98869 3.34 0.38 12.8 7 1 white 53 5.5 0.31 0.29 3.0 0.027 16.0 102.0 0.99067 3.23 0.56 11.2 6 0 white 54 5.5 0.32 0.45 4.9 0.028 25.0 191.0 0.9922 3.51 0.49 11.5 7 1 white 55 5.5 0.35 0.35 1.1 0.045 14.0 167.0 0.992 3.34 0.68 9.9 6 0 white 56 5.5 0.375 0.38 1.7 0.036 17.0 98.0 0.99142 3.29 0.39 10.5 6 0 white 57 5.6 0.15 0.26 5.55 0.051 51.0 139.0 0.99336 3.47 0.5 11.0 6 0 white 58 5.6 0.15 0.31 5.3 0.038 8.0 79.0 0.9923 3.3 0.39 10.5 6 0 white 59 5.6 0.16 0.27 1.4 0.044 53.0 168.0 0.9918 3.28 0.37 10.1 6 0 white 60 5.6 0.175 0.29 0.8 0.043 20.0 67.0 0.99112 3.28 0.48 9.9 6 0 white 61 5.6 0.185 0.19 7.1 0.048 36.0 110.0 0.99438 3.26 0.41 9.5 6 0 white 62 5.6 0.185 0.19 7.1 0.048 36.0 110.0 0.99438 3.26 0.41 9.5 6 0 white 63 5.6 0.22 0.32 1.2 0.024 29.0 97.0 0.98823 3.2 0.46 13.05 7 1 white 64 5.6 0.26 0.18 1.4 0.034 18.0 135.0 0.99174 3.32 0.35 10.2 6 0 white 65 5.6 0.26 0.26 5.7 0.031 12.0 80.0 0.9923 3.25 0.38 10.8 5 0 white 66 5.6 0.26 0.5 11.4 0.029 25.0 93.0 0.99428 3.23 0.49 10.5 6 0 white 67 5.6 0.28 0.28 4.2 0.044 52.0 158.0 0.992 3.35 0.44 10.7 7 1 white 68 5.6 0.3 0.1 6.4 0.043 34.0 142.0 0.99382 3.14 0.48 9.8 5 0 white 69 5.6 0.35 0.14 5.0 0.046 48.0 198.0 0.9937 3.3 0.71 10.3 5 0 white 70 5.6 0.49 0.13 4.5 0.039 17.0 116.0 0.9907 3.42 0.9 13.7 7 1 white 71 5.6 0.49 0.13 4.5 0.039 17.0 116.0 0.9907 3.42 0.9 13.7 7 1 white 72 5.6 0.66 0.0 2.2 0.087 3.0 11.0 0.99378 3.71 0.63 12.8 7 1 red 73 5.6 0.66 0.0 2.2 0.087 3.0 11.0 0.99378 3.71 0.63 12.8 7 1 red 74 5.7 0.15 0.47 11.4 0.035 49.0 128.0 0.99456 3.03 0.34 10.5 8 1 white 75 5.7 0.18 0.26 2.2 0.023 21.0 95.0 0.9893 3.07 0.54 12.3 6 0 white 76 5.7 0.18 0.36 1.2 0.046 9.0 71.0 0.99199 3.7 0.68 10.9 7 1 white 77 5.7 0.2 0.3 2.5 0.046 38.0 125.0 0.99276 3.34 0.5 9.9 6 0 white 78 5.7 0.21 0.32 0.9 0.038 38.0 121.0 0.99074 3.24 0.46 10.6 6 0 white 79 5.7 0.21 0.37 4.5 0.04 58.0 140.0 0.99332 3.29 0.62 10.6 6 0 white 80 5.7 0.22 0.2 16.0 0.044 41.0 113.0 0.99862 3.22 0.46 8.9 6 0 white 81 5.7 0.22 0.2 16.0 0.044 41.0 113.0 0.99862 3.22 0.46 8.9 6 0 white 82 5.7 0.22 0.2 16.0 0.044 41.0 113.0 0.99862 3.22 0.46 8.9 6 0 white 83 5.7 0.22 0.2 16.0 0.044 41.0 113.0 0.99862 3.22 0.46 8.9 6 0 white 84 5.7 0.22 0.2 16.0 0.044 41.0 113.0 0.99862 3.22 0.46 8.9 6 0 white 85 5.7 0.22 0.29 3.5 0.04 27.0 146.0 0.98999 3.17 0.36 12.1 6 0 white 86 5.7 0.23 0.28 9.65 0.025 26.0 121.0 0.9925 3.28 0.38 11.3 6 0 white 87 5.7 0.25 0.26 12.5 0.049 52.5 106.0 0.99691 3.08 0.45 9.4 6 0 white 88 5.7 0.25 0.26 12.5 0.049 52.5 120.0 0.99691 3.08 0.45 9.4 6 0 white 89 5.7 0.25 0.27 11.5 0.04 24.0 120.0 0.99411 3.33 0.31 10.8 6 0 white 90 5.7 0.26 0.24 17.8 0.059 23.0 124.0 0.99773 3.3 0.5 10.1 5 0 white 91 5.7 0.26 0.24 17.8 0.059 23.0 124.0 0.99773 3.3 0.5 10.1 5 0 white 92 5.7 0.26 0.24 17.8 0.059 23.0 124.0 0.99773 3.3 0.5 10.1 5 0 white 93 5.7 0.27 0.32 1.2 0.046 20.0 155.0 0.9934 3.8 0.41 10.2 6 0 white 94 5.7 0.28 0.24 17.5 0.044 60.0 167.0 0.9989 3.31 0.44 9.4 5 0 white 95 5.7 0.32 0.18 1.4 0.029 26.0 104.0 0.9906 3.44 0.37 11.0 6 0 white 96 5.7 0.32 0.38 4.75 0.033 23.0 94.0 0.991 3.42 0.42 11.8 7 1 white 97 5.7 0.36 0.34 4.2 0.026 21.0 77.0 0.9907 3.41 0.45 11.9 6 0 white 98 5.8 0.14 0.15 6.1 0.042 27.0 123.0 0.99362 3.06 0.6 9.9 6 0 white 99 5.8 0.15 0.32 1.2 0.037 14.0 119.0 0.99137 3.19 0.5 10.2 6 0 white 100 5.8 0.17 0.34 1.8 0.045 96.0 170.0 0.99035 3.38 0.9 11.8 8 1 white Rows: 1-100 | Columns: 14Note
VerticaPy offers a wide range of sample datasets that are ideal for training and testing purposes. You can explore the full list of available datasets in the Datasets, which provides detailed information on each dataset and how to use them effectively. These datasets are invaluable resources for honing your data analysis and machine learning skills within the VerticaPy environment.
You can easily divide your dataset into training and testing subsets using the
vDataFrame.train_test_split()method. This is a crucial step when preparing your data for machine learning, as it allows you to evaluate the performance of your models accurately.data = vpd.load_winequality() train, test = data.train_test_split(test_size = 0.2)
Warning
In this case, VerticaPy utilizes seeded randomization to guarantee the reproducibility of your data split. However, please be aware that this approach may lead to reduced performance. For a more efficient data split, you can use the
vDataFrame.to_db()method to save your results intotablesortemporary tables. This will help enhance the overall performance of the process.Balancing the Dataset¶
In VerticaPy, balancing a dataset to address class imbalances is made straightforward through the
balance()function within thepreprocessingmodule. This function enables users to rectify skewed class distributions efficiently. By specifying the target variable and setting parameters like the method for balancing, users can effortlessly achieve a more equitable representation of classes in their dataset. Whether opting for over-sampling, under-sampling, or a combination of both, VerticaPy’sbalance()function streamlines the process, empowering users to enhance the performance and fairness of their machine learning models trained on imbalanced data.To balance the dataset, use the following syntax.
from verticapy.machine_learning.vertica.preprocessing import balance balanced_train = balance( name = "my_schema.train_balanced", input_relation = train, y = "good", method = "hybrid", )
Note
With this code, a table named train_balanced is created in the my_schema schema. It can then be used to train the model. In the rest of the example, we will work with the full dataset.
Hint
Balancing the dataset is a crucial step in improving the accuracy of machine learning models, particularly when faced with imbalanced class distributions. By addressing disparities in the number of instances across different classes, the model becomes more adept at learning patterns from all classes rather than being biased towards the majority class. This, in turn, enhances the model’s ability to make accurate predictions for under-represented classes. The balanced dataset ensures that the model is not dominated by the majority class and, as a result, leads to more robust and unbiased model performance. Therefore, by employing techniques such as over-sampling, under-sampling, or a combination of both during dataset preparation, practitioners can significantly contribute to achieving higher accuracy and better generalization of their machine learning models.
Model Initialization¶
First we import the
XGBClassifiermodel:from verticapy.machine_learning.vertica import XGBClassifier
Then we can create the model:
model = XGBClassifier( max_ntree = 3, max_depth = 3, nbins = 6, split_proposal_method = 'global', tol = 0.001, learning_rate = 0.1, min_split_loss = 0, weight_reg = 0, sample = 0.7, col_sample_by_tree = 1, col_sample_by_node = 1, )
Hint
In
verticapy1.0.x and higher, you do not need to specify the model name, as the name is automatically assigned. If you need to re-use the model, you can fetch the model name from the model’s attributes.Important
The model name is crucial for the model management system and versioning. It’s highly recommended to provide a name if you plan to reuse the model later.
Model Training¶
We can now fit the model:
model.fit( train, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "good", test, ) =========== call_string =========== xgb_classifier('"public"."_verticapy_tmp_xgbclassifier_v_mldb_7d8b2786979811efa8720242ac120002_"', '"public"."_verticapy_tmp_view_v_mldb_7dba7450979811efa8720242ac120002_"', '"good"', '"fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density"' USING PARAMETERS exclude_columns='', max_ntree=3, max_depth=3, learning_rate=0.1, min_split_loss=0, weight_reg=0, nbins=6, objective=crossentropy, sampling_size=0.7, col_sample_by_tree=1, col_sample_by_node=1) ======= details ======= predictor | type ----------------+---------------- fixed_acidity |float or numeric volatile_acidity|float or numeric citric_acid |float or numeric residual_sugar |float or numeric chlorides |float or numeric density |float or numeric ================== initial_prediction ================== response_label| value --------------+-------- 0 | 0.00000 1 | 0.00000 =============== Additional Info =============== Name |Value ------------------+----- tree_count | 3 rejected_row_count| 0 accepted_row_count|5200
Important
To train a model, you can directly use the
vDataFrameor the name of the relation stored in the database. The test set is optional and is only used to compute the test metrics. Inverticapy, we don’t work usingXmatrices andyvectors. Instead, we work directly with lists of predictors and the response name.Features Importance¶
We can conveniently get the features importance:
result = model.features_importance()
Note
In models such as
XGBoost, feature importance is calculated using the average gain of each tree. To determine the final score, VerticaPy sums the scores of each tree, normalizes them and applies an activation function to scale them.Metrics¶
We can get the entire report using:
model.report()
value auc 0.6544676806083651 prc_auc 0.48533555468295325 accuracy 0.8111025443330764 log_loss 0.259887085975558 precision 0.0 recall 0.0 f1_score 0.0 mcc 0.0 informedness 0.0 markedness -0.18889745566692362 csi 0.0 Rows: 1-11 | Columns: 2Important
Most metrics are computed using a single SQL query, but some of them might require multiple SQL queries. Selecting only the necessary metrics in the report can help optimize performance. E.g.
model.report(metrics = ["auc", "accuracy"]).For classification models, we can easily modify the
cutoffto observe the effect on different metrics:model.report(cutoff = 0.2)
value auc 0.6544676806083651 prc_auc 0.48533555468295325 accuracy 0.18889745566692367 log_loss 0.259887085975558 precision 0.18889745566692367 recall 1.0 f1_score 0.317769130998703 mcc 0.0 informedness 0.0 markedness -0.8111025443330764 csi 0.18889745566692367 Rows: 1-11 | Columns: 2You can also use the
score()function to compute any classification metric. The default metric is the accuracy:model.score() Out[3]: 0.8111025443330764
Prediction¶
Prediction is straight-forward:
model.predict( test, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "prediction", )
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolorAbcprediction1 4.2 0.17 0.36 1.8 0.029 93.0 161.0 0.98999 3.65 0.89 12.0 7 1 white 0 2 4.8 0.225 0.38 1.2 0.074 47.0 130.0 0.99132 3.31 0.4 10.3 6 0 white 0 3 5.0 0.33 0.23 11.8 0.03 23.0 158.0 0.99322 3.41 0.64 11.8 6 0 white 0 4 5.0 0.455 0.18 1.9 0.036 33.0 106.0 0.98746 3.21 0.83 14.0 7 1 white 0 5 5.2 0.37 0.33 1.2 0.028 13.0 81.0 0.9902 3.37 0.38 11.7 6 0 white 0 6 5.3 0.21 0.29 0.7 0.028 11.0 66.0 0.99215 3.3 0.4 9.8 5 0 white 0 7 5.4 0.22 0.35 6.5 0.029 26.0 87.0 0.99092 3.29 0.44 12.5 7 1 white 0 8 5.4 0.33 0.31 4.0 0.03 27.0 108.0 0.99031 3.3 0.43 12.2 7 1 white 0 9 5.5 0.34 0.26 2.2 0.021 31.0 119.0 0.98919 3.55 0.49 13.0 8 1 white 0 10 5.5 0.49 0.03 1.8 0.044 28.0 87.0 0.9908 3.5 0.82 14.0 8 1 red 0 11 5.6 0.12 0.33 2.9 0.044 21.0 73.0 0.98896 3.17 0.32 12.9 8 1 white 0 12 5.6 0.19 0.39 1.1 0.043 17.0 67.0 0.9918 3.23 0.53 10.3 6 0 white 0 13 5.6 0.24 0.34 2.0 0.041 14.0 73.0 0.98981 3.04 0.45 11.6 7 1 white 0 14 5.6 0.26 0.0 10.2 0.038 13.0 111.0 0.99315 3.44 0.46 12.4 6 0 white 0 15 5.6 0.615 0.0 1.6 0.089 16.0 59.0 0.9943 3.58 0.52 9.9 5 0 red 0 16 5.7 0.15 0.28 3.7 0.045 57.0 151.0 0.9913 3.22 0.27 11.2 6 0 white 0 17 5.7 0.16 0.32 1.2 0.036 7.0 89.0 0.99111 3.26 0.48 11.0 5 0 white 0 18 5.7 0.24 0.3 1.3 0.03 25.0 98.0 0.98968 3.37 0.43 12.4 7 1 white 0 19 5.7 0.27 0.16 9.0 0.053 32.0 111.0 0.99474 3.36 0.37 10.4 6 0 white 0 20 5.7 0.44 0.13 7.0 0.025 28.0 173.0 0.9913 3.33 0.48 12.5 6 0 white 0 21 5.8 0.18 0.28 1.3 0.034 9.0 94.0 0.99092 3.21 0.52 11.2 6 0 white 0 22 5.8 0.23 0.2 2.0 0.043 39.0 154.0 0.99226 3.21 0.39 10.2 6 0 white 0 23 5.8 0.275 0.3 5.4 0.043 41.0 149.0 0.9926 3.33 0.42 10.8 7 1 white 0 24 5.8 0.34 0.21 7.2 0.041 48.0 146.0 0.99441 3.16 0.49 9.8 5 0 white 0 25 5.8 0.61 0.11 1.8 0.066 18.0 28.0 0.99483 3.55 0.66 10.9 6 0 red 0 26 5.9 0.12 0.27 4.8 0.03 40.0 110.0 0.99226 3.55 0.68 12.1 6 0 white 0 27 5.9 0.24 0.12 1.4 0.035 60.0 247.0 0.99358 3.34 0.44 9.6 6 0 white 0 28 5.9 0.26 0.21 12.5 0.034 36.0 152.0 0.9972 3.28 0.43 9.5 6 0 white 0 29 5.9 0.48 0.3 1.5 0.037 19.0 78.0 0.99057 3.47 0.42 11.9 7 1 white 0 30 5.9 0.61 0.08 2.1 0.071 16.0 24.0 0.99376 3.56 0.77 11.1 6 0 red 0 31 6.0 0.13 0.28 5.7 0.038 56.0 189.5 0.9948 3.59 0.43 10.6 7 1 white 0 32 6.0 0.19 0.26 1.4 0.039 30.0 104.0 0.98998 3.32 0.41 12.4 6 0 white 0 33 6.0 0.22 0.28 1.1 0.034 47.0 90.0 0.98862 3.22 0.38 12.6 6 0 white 0 34 6.0 0.22 0.28 1.1 0.034 47.0 90.0 0.98862 3.22 0.38 12.6 6 0 white 0 35 6.0 0.26 0.29 1.0 0.032 27.0 96.0 0.9896 3.38 0.44 12.3 6 0 white 0 36 6.0 0.27 0.15 1.5 0.056 35.0 128.0 0.9936 3.12 0.45 8.8 5 0 white 0 37 6.0 0.28 0.25 1.8 0.042 8.0 108.0 0.9929 3.08 0.55 9.0 5 0 white 0 38 6.0 0.28 0.49 6.8 0.048 61.0 222.0 0.9953 3.19 0.47 9.3 5 0 white 0 39 6.0 0.29 0.25 1.4 0.033 30.0 114.0 0.98794 3.08 0.43 13.2 6 0 white 0 40 6.0 0.29 0.41 10.8 0.048 55.0 149.0 0.9937 3.09 0.59 10.9666666666667 7 1 white 0 41 6.0 0.31 0.47 3.6 0.067 18.0 42.0 0.99549 3.39 0.66 11.0 6 0 red 0 42 6.0 0.495 0.27 5.0 0.157 17.0 129.0 0.99396 3.03 0.36 9.3 5 0 white 0 43 6.0 0.5 0.0 1.4 0.057 15.0 26.0 0.99448 3.36 0.45 9.5 5 0 red 0 44 6.0 0.64 0.05 1.9 0.066 9.0 17.0 0.99496 3.52 0.78 10.6 5 0 red 0 45 6.1 0.2 0.17 1.6 0.048 46.0 129.0 0.991 3.3 0.43 11.4 6 0 white 0 46 6.1 0.21 0.38 1.5 0.039 37.0 122.0 0.98972 3.2 0.43 12.0 6 0 white 0 47 6.1 0.22 0.28 16.55 0.059 54.0 135.0 0.99665 3.2 0.38 10.5 5 0 white 0 48 6.1 0.27 0.44 6.7 0.041 61.0 230.0 0.99505 3.12 0.4 8.9 5 0 white 0 49 6.1 0.28 0.27 4.7 0.03 56.0 140.0 0.99042 3.16 0.42 12.5 8 1 white 0 50 6.1 0.28 0.27 4.7 0.03 56.0 140.0 0.99042 3.16 0.42 12.5 8 1 white 0 51 6.1 0.31 0.34 2.8 0.042 59.5 162.0 0.99179 3.27 0.47 10.8 6 0 white 0 52 6.1 0.32 0.25 2.3 0.071 23.0 58.0 0.99633 3.42 0.97 10.6 5 0 red 0 53 6.1 0.32 0.33 10.7 0.036 27.0 98.0 0.99521 3.34 0.52 10.2 6 0 white 0 54 6.1 0.34 0.31 12.0 0.053 46.0 238.0 0.9977 3.16 0.48 8.6 5 0 white 0 55 6.1 0.4 0.31 0.9 0.048 23.0 170.0 0.993 3.22 0.77 9.5 6 0 white 0 56 6.2 0.22 0.27 1.5 0.064 20.0 132.0 0.9938 3.22 0.46 9.2 6 0 white 0 57 6.2 0.26 0.2 8.0 0.047 35.0 111.0 0.99445 3.11 0.42 10.4 6 0 white 0 58 6.2 0.28 0.43 13.0 0.039 64.0 233.0 0.99745 3.08 0.38 8.9 5 0 white 0 59 6.2 0.31 0.23 3.3 0.052 34.0 113.0 0.99429 3.16 0.48 8.4 5 0 white 0 60 6.2 0.32 0.24 4.1 0.051 34.0 149.0 0.99306 3.36 0.52 11.0 5 0 white 0 61 6.2 0.345 0.27 10.1 0.056 38.0 187.0 0.99486 3.31 0.56 10.6 5 0 white 0 62 6.2 0.35 0.25 18.4 0.051 28.0 182.0 0.99946 3.13 0.62 9.3 6 0 white 0 63 6.3 0.27 0.38 0.9 0.051 7.0 140.0 0.9926 3.45 0.5 10.5 7 1 white 0 64 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 0 65 6.3 0.28 0.24 8.45 0.031 32.0 172.0 0.9958 3.39 0.57 9.7 7 1 white 0 66 6.3 0.3 0.48 7.4 0.053 34.0 149.0 0.99472 3.18 0.53 9.8 5 0 white 0 67 6.3 0.31 0.34 2.2 0.045 20.0 77.0 0.9927 3.3 0.43 10.2 5 0 white 0 68 6.3 0.32 0.17 17.75 0.06 51.0 190.0 0.99916 3.13 0.48 8.8 6 0 white 0 69 6.3 0.34 0.33 4.6 0.034 19.0 80.0 0.9917 3.38 0.58 12.0 7 1 white 0 70 6.3 0.36 0.3 4.8 0.049 14.0 85.0 0.9932 3.28 0.39 10.6 5 0 white 0 71 6.4 0.105 0.29 1.1 0.035 44.0 140.0 0.99142 3.17 0.55 10.7 7 1 white 0 72 6.4 0.21 0.21 5.1 0.097 21.0 105.0 0.9939 3.07 0.46 9.6 5 0 white 0 73 6.4 0.21 0.28 5.9 0.047 29.0 101.0 0.99278 3.15 0.4 11.0 6 0 white 0 74 6.4 0.22 0.34 1.8 0.057 29.0 104.0 0.9959 3.81 0.57 10.3 6 0 white 0 75 6.4 0.22 0.49 7.5 0.054 42.0 151.0 0.9948 3.27 0.52 10.1 6 0 white 0 76 6.4 0.23 0.33 1.15 0.044 15.5 217.5 0.992 3.33 0.44 11.0 6 0 white 0 77 6.4 0.24 0.26 8.2 0.054 47.0 182.0 0.99538 3.12 0.5 9.5 5 0 white 0 78 6.4 0.24 0.27 1.5 0.04 35.0 105.0 0.98914 3.13 0.3 12.4 6 0 white 0 79 6.4 0.25 0.57 1.0 0.062 21.0 122.0 0.99238 3.0 0.4 9.5 5 0 white 0 80 6.4 0.25 0.57 1.0 0.062 21.0 122.0 0.99238 3.0 0.4 9.5 5 0 white 0 81 6.4 0.25 0.74 7.8 0.045 52.0 209.0 0.9956 3.21 0.42 9.2 6 0 white 0 82 6.4 0.28 0.28 3.0 0.04 19.0 98.0 0.99216 3.25 0.47 11.1 6 0 white 0 83 6.4 0.31 0.26 13.2 0.046 57.0 205.0 0.9975 3.17 0.41 9.6 5 0 white 0 84 6.4 0.31 0.31 12.9 0.045 55.0 161.0 0.99546 3.02 0.59 10.2 5 0 white 0 85 6.4 0.31 0.31 12.9 0.045 55.0 161.0 0.99546 3.02 0.59 10.2 5 0 white 0 86 6.4 0.36 0.53 2.2 0.23 19.0 35.0 0.9934 3.37 0.93 12.4 6 0 red 0 87 6.4 0.38 0.24 7.2 0.047 41.0 151.0 0.99604 3.11 0.6 9.2 5 0 white 0 88 6.4 0.79 0.04 2.2 0.061 11.0 17.0 0.99588 3.53 0.65 10.4 6 0 red 0 89 6.5 0.14 0.32 2.7 0.037 18.0 89.0 0.9924 3.4 0.74 11.5 7 1 white 0 90 6.5 0.15 0.44 12.6 0.052 65.0 158.0 0.99688 3.26 0.7 10.3 7 1 white 0 91 6.5 0.29 0.52 7.9 0.049 35.0 192.0 0.99551 3.16 0.51 9.5 6 0 white 0 92 6.5 0.33 0.24 14.5 0.048 20.0 96.0 0.99456 3.06 0.3 11.5 8 1 white 0 93 6.5 0.35 0.31 10.2 0.069 58.0 170.0 0.99692 3.18 0.49 9.4 5 0 white 0 94 6.5 0.4 0.1 2.0 0.076 30.0 47.0 0.99554 3.36 0.48 9.4 6 0 red 0 95 6.5 0.61 0.0 2.2 0.095 48.0 59.0 0.99541 3.61 0.7 11.5 6 0 red 0 96 6.6 0.21 0.29 5.35 0.029 43.0 106.0 0.99112 2.93 0.43 11.5 7 1 white 0 97 6.6 0.23 0.26 1.3 0.045 16.0 128.0 0.9934 3.36 0.6 10.0 6 0 white 0 98 6.6 0.23 0.29 14.45 0.057 29.0 144.0 0.99756 3.33 0.54 10.2 6 0 white 0 99 6.6 0.25 0.35 14.0 0.069 42.0 163.0 0.999 3.56 0.47 9.8 5 0 white 0 100 6.6 0.25 0.41 7.4 0.043 29.0 151.0 0.9946 3.15 0.6 10.2 7 1 white 0 Rows: 1-100 | Columns: 15Note
Predictions can be made automatically using the test set, in which case you don’t need to specify the predictors. Alternatively, you can pass only the
vDataFrameto thepredict()function, but in this case, it’s essential that the column names of thevDataFramematch the predictors and response name in the model.Probabilities¶
It is also easy to get the model’s probabilities:
model.predict_proba( test, [ "fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density", ], "prediction", )
123fixed_acidity123volatile_acidity123citric_acid123residual_sugar123chlorides123free_sulfur_dioxide123total_sulfur_dioxide123density123pH123sulphates123alcohol123quality123goodAbccolorAbcpredictionAbcprediction_0Abcprediction_11 4.2 0.17 0.36 1.8 0.029 93.0 161.0 0.98999 3.65 0.89 12.0 7 1 white 0 0.551095 0.448905 2 4.8 0.225 0.38 1.2 0.074 47.0 130.0 0.99132 3.31 0.4 10.3 6 0 white 0 0.551095 0.448905 3 5.0 0.33 0.23 11.8 0.03 23.0 158.0 0.99322 3.41 0.64 11.8 6 0 white 0 0.586944 0.413056 4 5.0 0.455 0.18 1.9 0.036 33.0 106.0 0.98746 3.21 0.83 14.0 7 1 white 0 0.586944 0.413056 5 5.2 0.37 0.33 1.2 0.028 13.0 81.0 0.9902 3.37 0.38 11.7 6 0 white 0 0.551095 0.448905 6 5.3 0.21 0.29 0.7 0.028 11.0 66.0 0.99215 3.3 0.4 9.8 5 0 white 0 0.551095 0.448905 7 5.4 0.22 0.35 6.5 0.029 26.0 87.0 0.99092 3.29 0.44 12.5 7 1 white 0 0.551095 0.448905 8 5.4 0.33 0.31 4.0 0.03 27.0 108.0 0.99031 3.3 0.43 12.2 7 1 white 0 0.551095 0.448905 9 5.5 0.34 0.26 2.2 0.021 31.0 119.0 0.98919 3.55 0.49 13.0 8 1 white 0 0.586944 0.413056 10 5.5 0.49 0.03 1.8 0.044 28.0 87.0 0.9908 3.5 0.82 14.0 8 1 red 0 0.586944 0.413056 11 5.6 0.12 0.33 2.9 0.044 21.0 73.0 0.98896 3.17 0.32 12.9 8 1 white 0 0.551095 0.448905 12 5.6 0.19 0.39 1.1 0.043 17.0 67.0 0.9918 3.23 0.53 10.3 6 0 white 0 0.551095 0.448905 13 5.6 0.24 0.34 2.0 0.041 14.0 73.0 0.98981 3.04 0.45 11.6 7 1 white 0 0.551095 0.448905 14 5.6 0.26 0.0 10.2 0.038 13.0 111.0 0.99315 3.44 0.46 12.4 6 0 white 0 0.586944 0.413056 15 5.6 0.615 0.0 1.6 0.089 16.0 59.0 0.9943 3.58 0.52 9.9 5 0 red 0 0.586944 0.413056 16 5.7 0.15 0.28 3.7 0.045 57.0 151.0 0.9913 3.22 0.27 11.2 6 0 white 0 0.551095 0.448905 17 5.7 0.16 0.32 1.2 0.036 7.0 89.0 0.99111 3.26 0.48 11.0 5 0 white 0 0.551095 0.448905 18 5.7 0.24 0.3 1.3 0.03 25.0 98.0 0.98968 3.37 0.43 12.4 7 1 white 0 0.551095 0.448905 19 5.7 0.27 0.16 9.0 0.053 32.0 111.0 0.99474 3.36 0.37 10.4 6 0 white 0 0.586944 0.413056 20 5.7 0.44 0.13 7.0 0.025 28.0 173.0 0.9913 3.33 0.48 12.5 6 0 white 0 0.586944 0.413056 21 5.8 0.18 0.28 1.3 0.034 9.0 94.0 0.99092 3.21 0.52 11.2 6 0 white 0 0.551095 0.448905 22 5.8 0.23 0.2 2.0 0.043 39.0 154.0 0.99226 3.21 0.39 10.2 6 0 white 0 0.586944 0.413056 23 5.8 0.275 0.3 5.4 0.043 41.0 149.0 0.9926 3.33 0.42 10.8 7 1 white 0 0.551095 0.448905 24 5.8 0.34 0.21 7.2 0.041 48.0 146.0 0.99441 3.16 0.49 9.8 5 0 white 0 0.586944 0.413056 25 5.8 0.61 0.11 1.8 0.066 18.0 28.0 0.99483 3.55 0.66 10.9 6 0 red 0 0.586944 0.413056 26 5.9 0.12 0.27 4.8 0.03 40.0 110.0 0.99226 3.55 0.68 12.1 6 0 white 0 0.586944 0.413056 27 5.9 0.24 0.12 1.4 0.035 60.0 247.0 0.99358 3.34 0.44 9.6 6 0 white 0 0.586944 0.413056 28 5.9 0.26 0.21 12.5 0.034 36.0 152.0 0.9972 3.28 0.43 9.5 6 0 white 0 0.609113 0.390887 29 5.9 0.48 0.3 1.5 0.037 19.0 78.0 0.99057 3.47 0.42 11.9 7 1 white 0 0.551095 0.448905 30 5.9 0.61 0.08 2.1 0.071 16.0 24.0 0.99376 3.56 0.77 11.1 6 0 red 0 0.586944 0.413056 31 6.0 0.13 0.28 5.7 0.038 56.0 189.5 0.9948 3.59 0.43 10.6 7 1 white 0 0.551095 0.448905 32 6.0 0.19 0.26 1.4 0.039 30.0 104.0 0.98998 3.32 0.41 12.4 6 0 white 0 0.586944 0.413056 33 6.0 0.22 0.28 1.1 0.034 47.0 90.0 0.98862 3.22 0.38 12.6 6 0 white 0 0.551095 0.448905 34 6.0 0.22 0.28 1.1 0.034 47.0 90.0 0.98862 3.22 0.38 12.6 6 0 white 0 0.551095 0.448905 35 6.0 0.26 0.29 1.0 0.032 27.0 96.0 0.9896 3.38 0.44 12.3 6 0 white 0 0.551095 0.448905 36 6.0 0.27 0.15 1.5 0.056 35.0 128.0 0.9936 3.12 0.45 8.8 5 0 white 0 0.586944 0.413056 37 6.0 0.28 0.25 1.8 0.042 8.0 108.0 0.9929 3.08 0.55 9.0 5 0 white 0 0.586944 0.413056 38 6.0 0.28 0.49 6.8 0.048 61.0 222.0 0.9953 3.19 0.47 9.3 5 0 white 0 0.551095 0.448905 39 6.0 0.29 0.25 1.4 0.033 30.0 114.0 0.98794 3.08 0.43 13.2 6 0 white 0 0.586944 0.413056 40 6.0 0.29 0.41 10.8 0.048 55.0 149.0 0.9937 3.09 0.59 10.9666666666667 7 1 white 0 0.551095 0.448905 41 6.0 0.31 0.47 3.6 0.067 18.0 42.0 0.99549 3.39 0.66 11.0 6 0 red 0 0.551095 0.448905 42 6.0 0.495 0.27 5.0 0.157 17.0 129.0 0.99396 3.03 0.36 9.3 5 0 white 0 0.586944 0.413056 43 6.0 0.5 0.0 1.4 0.057 15.0 26.0 0.99448 3.36 0.45 9.5 5 0 red 0 0.586944 0.413056 44 6.0 0.64 0.05 1.9 0.066 9.0 17.0 0.99496 3.52 0.78 10.6 5 0 red 0 0.586944 0.413056 45 6.1 0.2 0.17 1.6 0.048 46.0 129.0 0.991 3.3 0.43 11.4 6 0 white 0 0.586944 0.413056 46 6.1 0.21 0.38 1.5 0.039 37.0 122.0 0.98972 3.2 0.43 12.0 6 0 white 0 0.551095 0.448905 47 6.1 0.22 0.28 16.55 0.059 54.0 135.0 0.99665 3.2 0.38 10.5 5 0 white 0 0.59893 0.40107 48 6.1 0.27 0.44 6.7 0.041 61.0 230.0 0.99505 3.12 0.4 8.9 5 0 white 0 0.551095 0.448905 49 6.1 0.28 0.27 4.7 0.03 56.0 140.0 0.99042 3.16 0.42 12.5 8 1 white 0 0.586944 0.413056 50 6.1 0.28 0.27 4.7 0.03 56.0 140.0 0.99042 3.16 0.42 12.5 8 1 white 0 0.586944 0.413056 51 6.1 0.31 0.34 2.8 0.042 59.5 162.0 0.99179 3.27 0.47 10.8 6 0 white 0 0.551095 0.448905 52 6.1 0.32 0.25 2.3 0.071 23.0 58.0 0.99633 3.42 0.97 10.6 5 0 red 0 0.619575 0.380425 53 6.1 0.32 0.33 10.7 0.036 27.0 98.0 0.99521 3.34 0.52 10.2 6 0 white 0 0.551095 0.448905 54 6.1 0.34 0.31 12.0 0.053 46.0 238.0 0.9977 3.16 0.48 8.6 5 0 white 0 0.60949 0.39051 55 6.1 0.4 0.31 0.9 0.048 23.0 170.0 0.993 3.22 0.77 9.5 6 0 white 0 0.551095 0.448905 56 6.2 0.22 0.27 1.5 0.064 20.0 132.0 0.9938 3.22 0.46 9.2 6 0 white 0 0.586944 0.413056 57 6.2 0.26 0.2 8.0 0.047 35.0 111.0 0.99445 3.11 0.42 10.4 6 0 white 0 0.586944 0.413056 58 6.2 0.28 0.43 13.0 0.039 64.0 233.0 0.99745 3.08 0.38 8.9 5 0 white 0 0.59893 0.40107 59 6.2 0.31 0.23 3.3 0.052 34.0 113.0 0.99429 3.16 0.48 8.4 5 0 white 0 0.586944 0.413056 60 6.2 0.32 0.24 4.1 0.051 34.0 149.0 0.99306 3.36 0.52 11.0 5 0 white 0 0.586944 0.413056 61 6.2 0.345 0.27 10.1 0.056 38.0 187.0 0.99486 3.31 0.56 10.6 5 0 white 0 0.586944 0.413056 62 6.2 0.35 0.25 18.4 0.051 28.0 182.0 0.99946 3.13 0.62 9.3 6 0 white 0 0.619575 0.380425 63 6.3 0.27 0.38 0.9 0.051 7.0 140.0 0.9926 3.45 0.5 10.5 7 1 white 0 0.551095 0.448905 64 6.3 0.27 0.49 1.2 0.063 35.0 92.0 0.9911 3.38 0.42 12.2 6 0 white 0 0.551095 0.448905 65 6.3 0.28 0.24 8.45 0.031 32.0 172.0 0.9958 3.39 0.57 9.7 7 1 white 0 0.609113 0.390887 66 6.3 0.3 0.48 7.4 0.053 34.0 149.0 0.99472 3.18 0.53 9.8 5 0 white 0 0.551095 0.448905 67 6.3 0.31 0.34 2.2 0.045 20.0 77.0 0.9927 3.3 0.43 10.2 5 0 white 0 0.551095 0.448905 68 6.3 0.32 0.17 17.75 0.06 51.0 190.0 0.99916 3.13 0.48 8.8 6 0 white 0 0.619575 0.380425 69 6.3 0.34 0.33 4.6 0.034 19.0 80.0 0.9917 3.38 0.58 12.0 7 1 white 0 0.551095 0.448905 70 6.3 0.36 0.3 4.8 0.049 14.0 85.0 0.9932 3.28 0.39 10.6 5 0 white 0 0.551095 0.448905 71 6.4 0.105 0.29 1.1 0.035 44.0 140.0 0.99142 3.17 0.55 10.7 7 1 white 0 0.551095 0.448905 72 6.4 0.21 0.21 5.1 0.097 21.0 105.0 0.9939 3.07 0.46 9.6 5 0 white 0 0.586944 0.413056 73 6.4 0.21 0.28 5.9 0.047 29.0 101.0 0.99278 3.15 0.4 11.0 6 0 white 0 0.551095 0.448905 74 6.4 0.22 0.34 1.8 0.057 29.0 104.0 0.9959 3.81 0.57 10.3 6 0 white 0 0.59893 0.40107 75 6.4 0.22 0.49 7.5 0.054 42.0 151.0 0.9948 3.27 0.52 10.1 6 0 white 0 0.551095 0.448905 76 6.4 0.23 0.33 1.15 0.044 15.5 217.5 0.992 3.33 0.44 11.0 6 0 white 0 0.551095 0.448905 77 6.4 0.24 0.26 8.2 0.054 47.0 182.0 0.99538 3.12 0.5 9.5 5 0 white 0 0.586944 0.413056 78 6.4 0.24 0.27 1.5 0.04 35.0 105.0 0.98914 3.13 0.3 12.4 6 0 white 0 0.586944 0.413056 79 6.4 0.25 0.57 1.0 0.062 21.0 122.0 0.99238 3.0 0.4 9.5 5 0 white 0 0.551095 0.448905 80 6.4 0.25 0.57 1.0 0.062 21.0 122.0 0.99238 3.0 0.4 9.5 5 0 white 0 0.551095 0.448905 81 6.4 0.25 0.74 7.8 0.045 52.0 209.0 0.9956 3.21 0.42 9.2 6 0 white 0 0.551095 0.448905 82 6.4 0.28 0.28 3.0 0.04 19.0 98.0 0.99216 3.25 0.47 11.1 6 0 white 0 0.551095 0.448905 83 6.4 0.31 0.26 13.2 0.046 57.0 205.0 0.9975 3.17 0.41 9.6 5 0 white 0 0.619575 0.380425 84 6.4 0.31 0.31 12.9 0.045 55.0 161.0 0.99546 3.02 0.59 10.2 5 0 white 0 0.551095 0.448905 85 6.4 0.31 0.31 12.9 0.045 55.0 161.0 0.99546 3.02 0.59 10.2 5 0 white 0 0.551095 0.448905 86 6.4 0.36 0.53 2.2 0.23 19.0 35.0 0.9934 3.37 0.93 12.4 6 0 red 0 0.551095 0.448905 87 6.4 0.38 0.24 7.2 0.047 41.0 151.0 0.99604 3.11 0.6 9.2 5 0 white 0 0.619575 0.380425 88 6.4 0.79 0.04 2.2 0.061 11.0 17.0 0.99588 3.53 0.65 10.4 6 0 red 0 0.619575 0.380425 89 6.5 0.14 0.32 2.7 0.037 18.0 89.0 0.9924 3.4 0.74 11.5 7 1 white 0 0.551095 0.448905 90 6.5 0.15 0.44 12.6 0.052 65.0 158.0 0.99688 3.26 0.7 10.3 7 1 white 0 0.59893 0.40107 91 6.5 0.29 0.52 7.9 0.049 35.0 192.0 0.99551 3.16 0.51 9.5 6 0 white 0 0.551095 0.448905 92 6.5 0.33 0.24 14.5 0.048 20.0 96.0 0.99456 3.06 0.3 11.5 8 1 white 0 0.586944 0.413056 93 6.5 0.35 0.31 10.2 0.069 58.0 170.0 0.99692 3.18 0.49 9.4 5 0 white 0 0.60949 0.39051 94 6.5 0.4 0.1 2.0 0.076 30.0 47.0 0.99554 3.36 0.48 9.4 6 0 red 0 0.586944 0.413056 95 6.5 0.61 0.0 2.2 0.095 48.0 59.0 0.99541 3.61 0.7 11.5 6 0 red 0 0.586944 0.413056 96 6.6 0.21 0.29 5.35 0.029 43.0 106.0 0.99112 2.93 0.43 11.5 7 1 white 0 0.551095 0.448905 97 6.6 0.23 0.26 1.3 0.045 16.0 128.0 0.9934 3.36 0.6 10.0 6 0 white 0 0.586944 0.413056 98 6.6 0.23 0.29 14.45 0.057 29.0 144.0 0.99756 3.33 0.54 10.2 6 0 white 0 0.59893 0.40107 99 6.6 0.25 0.35 14.0 0.069 42.0 163.0 0.999 3.56 0.47 9.8 5 0 white 0 0.59893 0.40107 100 6.6 0.25 0.41 7.4 0.043 29.0 151.0 0.9946 3.15 0.6 10.2 7 1 white 0 0.551095 0.448905 Rows: 1-100 | Columns: 17Note
Probabilities are added to the
vDataFrame, and VerticaPy uses the corresponding probability function in SQL behind the scenes. You can use thepos_labelparameter to add only the probability of the selected category.Confusion Matrix¶
You can obtain the confusion matrix of your choice by specifying the desired cutoff.
model.confusion_matrix(cutoff = 0.5) Out[4]: array([[1052, 0], [ 245, 0]])
Note
In classification, the
cutoffis a threshold value used to determine class assignment based on predicted probabilities or scores from a classification model. In binary classification, if the predicted probability for a specific class is greater than or equal to the cutoff, the instance is assigned to the positive class; otherwise, it is assigned to the negative class. Adjusting the cutoff allows for trade-offs between true positives and false positives, enabling the model to be optimized for specific objectives or to consider the relative costs of different classification errors. The choice of cutoff is critical for tailoring the model’s performance to meet specific needs.Main Plots (Classification Curves)¶
Classification models allow for the creation of various plots that are very helpful in understanding the model, such as the ROC Curve, PRC Curve, Cutoff Curve, Gain Curve, and more.
Most of the classification curves can be found in the Machine Learning - Classification Curve.
For example, let’s draw the model’s ROC curve.
model.roc_curve()
Important
Most of the curves have a parameter called
nbins, which is essential for estimating metrics. The larger thenbins, the more precise the estimation, but it can significantly impact performance. Exercise caution when increasing this parameter excessively.Hint
In binary classification, various curves can be easily plotted. However, in multi-class classification, it’s important to select the
pos_label, representing the class to be treated as positive when drawing the curve.Other Plots¶
Tree models can be visualized by drawing their tree plots. For more examples, check out Machine Learning - Tree Plots.
model.plot_tree()
Note
The above example may not render properly in the doc because of the huge size of the tree. But it should render nicely in jupyter environment.
In order to plot graph using graphviz separately, you can extract the graphviz DOT file code as follows:
model.to_graphviz() Out[5]: 'digraph Tree {\ngraph [bgcolor="#FFFFFFDD"];\n0 [label="\\"density\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n0 -> 1 [label="<= 0.995772", color="#000000", fontcolor="#000000"]\n0 -> 2 [label="> 0.995772", color="#000000", fontcolor="#000000"]\n1 [label="\\"citric_acid\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n1 -> 3 [label="<= 0.276667", color="#000000", fontcolor="#000000"]\n1 -> 4 [label="> 0.276667", color="#000000", fontcolor="#000000"]\n2 [label="\\"volatile_acidity\\"", shape="box", style="filled", fillcolor="#FFFFFFDD", fontcolor="#000000", color="#000000"]\n2 -> 5 [label="<= 0.288333", color="#000000", fontcolor="#000000"]\n2 -> 6 [label="> 0.288333", color="#000000", fontcolor="#000000"]\n3 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.28</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.28</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n4 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 0.78</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -0.78</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n5 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.32</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.32</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n6 [label=<<table border="0" cellspacing="0"> <tr><td port="port1" border="1" bgcolor="#87cefa" color="#000000"><FONT color="#000000"><b>prediction: 0 </b></FONT></td></tr><tr><td port="port0" border="1" align="left" color="#000000"><FONT color="#000000">logodds(0): 1.76</FONT></td></tr><tr><td port="port1" border="1" align="left" color="#000000"><FONT color="#000000">logodds(1): -1.76</FONT></td></tr></table>>, fillcolor="#FFFFFFDD", fontcolor="#000000", shape="none", color="#000000"]\n}'
This string can then be copied into a DOT file which can beparsed by graphviz.
Contour plot is another useful plot that can be produced for models with two predictors.
model.contour()
Important
Machine learning models with two predictors can usually benefit from their own contour plot. This visual representation aids in exploring predictions and gaining a deeper understanding of how these models perform in different scenarios. Please refer to Contour Plot for more examples.
Parameter Modification¶
In order to see the parameters:
model.get_params() Out[6]: {'max_ntree': 3, 'max_depth': 3, 'nbins': 6, 'split_proposal_method': 'global', 'tol': 0.001, 'learning_rate': 0.1, 'min_split_loss': 0, 'weight_reg': 0, 'sample': 0.7, 'col_sample_by_tree': 1, 'col_sample_by_node': 1}
And to manually change some of the parameters:
model.set_params({'max_depth': 5})
Model Register¶
In order to register the model for tracking and versioning:
model.register("model_v1")
Please refer to /notebooks/ml/model_tracking_versioning/index.ipynb for more details on model tracking and versioning.
Model Exporting¶
To Memmodel
model.to_memmodel()
Note
MemModelobjects serve as in-memory representations of machine learning models. They can be used for both in-database and in-memory prediction tasks. These objects can be pickled in the same way that you would pickle ascikit-learnmodel.The preceding methods for exporting the model use
MemModel, and it is recommended to useMemModeldirectly.To SQL
You can get the SQL query equivalent of the XGB model by:
model.to_sql() Out[8]: '(CASE WHEN (1 / (1 + EXP(- (-1.3959376373916976 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.28077 ELSE -0.776 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.3165 ELSE -1.7581 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.14298 ELSE -0.639964 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN -1.69394 ELSE -1.2682 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.08972 ELSE -0.635001 END) ELSE (CASE WHEN "fixed_acidity" < 9.85 THEN -1.4254 ELSE -0.825923 END) END)))))) / ((1 / (1 + EXP(- (1.3959376373916976 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.28077 ELSE 0.776 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN 1.3165 ELSE 1.7581 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.14298 ELSE 0.639964 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN 1.69394 ELSE 1.2682 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN 1.08972 ELSE 0.635001 END) ELSE (CASE WHEN "fixed_acidity" < 9.85 THEN 1.4254 ELSE 0.825923 END) END)))))) + (1 / (1 + EXP(- (-1.3959376373916976 + 0.1 * ((CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.28077 ELSE -0.776 END) ELSE (CASE WHEN "volatile_acidity" < 0.288333 THEN -1.3165 ELSE -1.7581 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.14298 ELSE -0.639964 END) ELSE (CASE WHEN "citric_acid" < 0.276667 THEN -1.69394 ELSE -1.2682 END) END) + (CASE WHEN "density" < 0.995772 THEN (CASE WHEN "citric_acid" < 0.276667 THEN -1.08972 ELSE -0.635001 END) ELSE (CASE WHEN "fixed_acidity" < 9.85 THEN -1.4254 ELSE -0.825923 END) END))))))) > 0.5 THEN 1 ELSE 0 END)'
Note
This SQL query can be directly used in any database.
Deploy SQL
To get the SQL query which uses Vertica functions use below:
model.deploySQL() Out[9]: 'PREDICT_XGB_CLASSIFIER("fixed_acidity", "volatile_acidity", "citric_acid", "residual_sugar", "chlorides", "density" USING PARAMETERS model_name = \'"public"."_verticapy_tmp_xgbclassifier_v_mldb_7d8b2786979811efa8720242ac120002_"\', match_by_pos = \'true\')'
To Python
To obtain the prediction function in Python syntax, use the following code:
X = [[4.2, 0.17, 0.36, 1.8, 0.029, 0.9899]] model.to_python()(X) Out[11]: array([0])
Hint
The
to_python()method is used to retrieve predictions, probabilities, or cluster distances. For specific details on how to use this method for different model types, refer to the relevant documentation for each model.- __init__(name: str = None, overwrite_model: bool = False, max_ntree: int = 10, max_depth: int = 5, nbins: int = 32, split_proposal_method: Literal['local', 'global'] = 'global', tol: float = 0.001, learning_rate: float = 0.1, min_split_loss: float = 0.0, weight_reg: float = 0.0, sample: float = 1.0, col_sample_by_tree: float = 1.0, col_sample_by_node: float = 1.0) None¶
Must be overridden in the child class
Methods
__init__([name, overwrite_model, max_ntree, ...])Must be overridden in the child class
classification_report([metrics, cutoff, ...])Computes a classification report using multiple model evaluation metrics (
auc,accuracy,f1...).confusion_matrix([pos_label, cutoff])Computes the model confusion matrix.
contour([pos_label, nbins, chart])Draws the model's contour plot.
cutoff_curve([pos_label, nbins, show, chart])Draws the model Cutoff curve.
deploySQL([X, pos_label, cutoff, allSQL])Returns the SQL code needed to deploy the model.
does_model_exists(name[, raise_error, ...])Checks whether the model is stored in the Vertica database.
drop()Drops the model from the Vertica database.
export_models(name, path[, kind])Exports machine learning models.
features_importance([tree_id, show, chart])Computes the model's features importance.
fit(input_relation, X, y[, test_relation, ...])Trains the model.
get_attributes([attr_name])Returns the model attributes.
get_match_index(x, col_list[, str_check])Returns the matching index.
Returns the parameters of the model.
get_plotting_lib([class_name, chart, ...])Returns the first available library (Plotly, Matplotlib, or Highcharts) to draw a specific graphic.
get_score([tree_id])Returns the feature importance metrics for the input tree.
get_tree([tree_id])Returns a table with all the input tree information.
get_vertica_attributes([attr_name])Returns the model Vertica attributes.
import_models(path[, schema, kind])Imports machine learning models.
lift_chart([pos_label, nbins, show, chart])Draws the model Lift Chart.
plot([max_nb_points, chart])Draws the model.
plot_tree([tree_id, pic_path])Draws the input tree.
prc_curve([pos_label, nbins, show, chart])Draws the model PRC curve.
predict(vdf[, X, name, cutoff, inplace])Predicts using the input relation.
predict_proba(vdf[, X, name, pos_label, inplace])Returns the model's probabilities using the input relation.
register(registered_name[, raise_error])Registers the model and adds it to in-DB Model versioning environment with a status of 'under_review'.
report([metrics, cutoff, labels, nbins])Computes a classification report using multiple model evaluation metrics (
auc,accuracy,f1...).roc_curve([pos_label, nbins, show, chart])Draws the model ROC curve.
score([metric, average, pos_label, cutoff, ...])Computes the model score.
set_params([parameters])Sets the parameters of the model.
Summarizes the model.
to_binary(path)Exports the model to the Vertica Binary format.
to_graphviz([tree_id, classes_color, ...])Returns the code for a Graphviz tree.
to_json([path])Creates a Python
XGBoostJSON fileConverts the model to an InMemory object that can be used for different types of predictions.
to_pmml(path)Exports the model to PMML.
to_python([return_proba, ...])Returns the Python function needed for in-memory scoring without using built-in Vertica functions.
to_sql([X, return_proba, ...])Returns the SQL code needed to deploy the model without using built-in Vertica functions.
to_tf(path)Exports the model to the Frozen Graph format (TensorFlow).
Attributes